RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 LOC107986453A0A1B0GWG9 222 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IGHG3P01860 377 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 HLA-DQA1P01909 254 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 LGALS1P09382 135 aaKnown RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 GZMHP20718 246 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 LINC00310P59036 64 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 KRTDAPP60985 99 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 RBX1P62877 108 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CD300CQ08708 224 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 C19orf48Q6RUI8 117 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 FOXL2NBQ6ZUU3 175 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 DEFB125Q8N687 156 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 OR4K5Q8NGD3 323 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 MGST2Q99735 147 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 GGTLC1Q9BX51 225 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 SEC11CQ9BY50 192 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 C21orf62Q9NYP8 219 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 FABP5P3A8MUU1 101 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 TRGC2P03986 189 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IL4P05112 153 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 RPL7P18124 248 aaKnown RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CRYGSP22914 178 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 DCDP81605 110 aaKnown RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM30BQ3MIR4 351 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 LAIR2Q6ISS4 152 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 TAF15Q92804 592 aaKnown RBP eCLIP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 NRIP2Q9BQI9 281 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CST11Q9H112 138 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 FAM60AQ9NP50 221 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 ANKRD12Q6UB98 2062 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV5-10-1A0A0J9YXX1 117 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 A0A1W2PRS3 328 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 YPEL1O60688 119 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CD28P10747 220 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CD59P13987 128 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF136P52737 540 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 Q1RN00 199 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 MRPL2Q5T653 305 aaKnown RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 PATE1Q8WXA2 126 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
NEDD4-209ENST00000508871 LSM2Q9Y333 95 aaKnown RBP3.13□□□□□ -1.91
NEDD4-209ENST00000508871 M0R381 172 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 IGHA1P01876 353 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 OPRM1P35372 400 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 MESTQ5EB52 335 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 OR2T35Q8NGX2 323 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 RPS4Y2Q8TD47 263 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 C17orf77Q96MU5 243 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 NRTNQ99748 197 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TRAPPC1Q9Y5R8 145 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF724A8MTY0 619 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 GGTLC3B5MD39 225 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 HTR1AP08908 422 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV4-38-2P0DP08 117 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 EGR2P11161 476 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 FXYD7P58549 80 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 HBBP68871 147 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 FAM162BQ5T6X4 162 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF627Q7L945 461 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM106AQ96A25 262 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 C14orf144Q96I85 54 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CAMK2N2Q96S95 79 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV7-81A0A0B4J1V7 117 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 J3QRE1 110 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 K7EP13 123 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CD8AP01732 235 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ATP5G1P05496 136 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 MYCNOSP40205 109 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF506Q5JVG8 444 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 SLC25A48Q6ZT89 311 aaKnown RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TOMM6Q96B49 74 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 C2orf50Q96LR7 162 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 RTBDNQ9BSG5 229 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 NDUFB11Q9NX14 153 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 MRPS18CQ9Y3D5 142 aaKnown RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TRBV20-1A0A075B6N2 111 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 SYNGR1O43759 233 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CYB5AP00167 134 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CECR9P0C854 216 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 MGST1P10620 155 aaKnown RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 AQP1P29972 269 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CDK5R1Q15078 307 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 OSR2Q8N2R0 312 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF433Q8N7K0 673 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 PMCHL2Q9BQD1 86 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TSSK6Q9BXA6 273 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 Q9H3A6 140 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 HEATR5BQ9P2D3 2071 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CPSF4LA6NMK7 179 aaKnown RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 PEX7O00628 323 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 SMCPP49901 116 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 FOXG1P55316 489 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-209ENST00000508871 SLC38A11Q08AI6 406 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 ARIH2OSQ8N7S6 290 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM75Q8N9X5 138 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 C16orf52Q8NHV5 167 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
NEDD4-209ENST00000508871 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
NEDD4-209ENST00000508871 BGLAPP02818 100 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms