RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IL24Q13007 206 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 CT45A1Q5HYN5 189 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 LINC01590Q5TEZ4 76 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 SLC25A26Q70HW3 274 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 C15orf53Q8NAA6 179 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 C11orf72Q8NBR9 251 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 CT45A3Q8NHU0 189 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 GRPEL2Q8TAA5 225 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 OR51E1Q8TCB6 317 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 OR52B2Q96RD2 323 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 TEAD3Q99594 435 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 ABCB9Q9NP78 766 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 GPR84Q9NQS5 396 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 PSMC3IPQ9P2W1 217 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 GMEB1Q9Y692 573 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 A0A087WTM6 91 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 A0A1B0GTI1 187 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 A0A1B0GW64 132 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 SMIM23A6NLE4 172 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 A8MWP6 167 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 COPEO14579 308 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF682O95780 498 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CA2P00918 260 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 NRASP01111 189 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CSN2P05814 226 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 SCTP09683 121 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 C8orf88P0DMB2 117 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CD37P11049 281 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 HRES1P13985 223 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 HTN3P15516 51 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 PRKACAP17612 351 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CFL1P23528 166 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 HSD11B1P28845 292 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 OMPP47874 163 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 POLR2JP52435 117 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CRISP1P54107 249 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 GRB2P62993 217 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 YIF1BQ5BJH7 314 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 FAHD1Q6P587 224 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 DNM1P34Q6PK57 102 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 FAM131AQ6UXB0 335 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 ASCL4Q6XD76 172 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 Q6ZSA8 131 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 MBOAT2Q6ZWT7 520 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 VTCN1Q7Z7D3 282 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 OFCC1Q8IZS5 231 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 FAM58AQ8N1B3 248 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 FAM24BQ8N5W8 94 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 LINC00311Q8N616 119 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 TCTEX1D1Q8N7M0 179 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 PROKR2Q8NFJ6 384 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 OR51T1Q8NGJ9 327 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 OR8D4Q8NGM9 314 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 RASSF5Q8WWW0 418 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 PRRC1Q96M27 445 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 TMEM70Q9BUB7 260 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 PKIBQ9C010 78 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CHST5Q9GZS9 411 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 CST11Q9H112 138 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 RGCCQ9H4X1 137 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 FAM206AQ9NX38 181 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 ENPP5Q9UJA9 477 aa1.84□□□□□ -2.11
TOPBP1-206ENST00000508524 SSPOA2VEC9 5147 aa1.84□□□□□ -2.12
TOPBP1-206ENST00000508524 MEIKINA0A087WXM9 373 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 IGKV1-9A0A0C4DH69 117 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 CXCR6O00574 342 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 TTRP02766 147 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 BPGMP07738 259 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 MIFP14174 115 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 SPI1P17947 270 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 NTF3P20783 257 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 HCCSP53701 268 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 RHOGP84095 191 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 TMEM69Q5SWH9 247 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 GPR107Q5VW38 600 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 OR11H7Q8NGC8 314 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 FAM81AQ8TBF8 368 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 ZNF251Q9BRH9 671 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 TTTY10Q9BZA0 68 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 MTFP1Q9UDX5 166 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 UTP11Q9Y3A2 253 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 V9GYS6 101 aa1.83□□□□□ -2.12
TOPBP1-206ENST00000508524 TRBV9A0A0B4J1U6 114 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 TRAV25A0A0B4J276 109 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 NDUFC2-KCTD14E9PQ53 114 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 H3BUA1 57 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 SDCBPO00560 298 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 DHRS3O75911 302 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 IGKV1-16P04430 117 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 IDO1P14902 403 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 RPL14P50914 215 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 EMP1P54849 157 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 CDC42P60953 191 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 TMEM267Q0VDI3 215 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 MED21Q13503 144 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 FXYD3Q14802 87 aa1.82□□□□□ -2.12
TOPBP1-206ENST00000508524 TRAM2Q15035 370 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms