RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 DHRS2Q13268 280 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 PPP1R1AQ13522 171 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 TMEM217Q8N7C4 229 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 OR51G1Q8NGK1 321 aa10.42□□□□□ -0.74
RAB28-205ENST00000508274 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 LY6G6CO95867 125 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 C4BPBP20851 252 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 ZNF90Q03938 601 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 GAMTQ14353 236 aa10.41□□□□□ -0.74
RAB28-205ENST00000508274 PHLDA1Q8WV24 401 aaPredicted RBP10.41□□□□□ -0.74
RAB28-205ENST00000508274 C11orf68Q9H3H3 251 aaKnown RBP10.41□□□□□ -0.74
RAB28-205ENST00000508274 HELTA6NFD8 242 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 BUB3O43684 328 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 SFT2D2O95562 160 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 NANOS2P60321 138 aaKnown RBP10.4□□□□□ -0.74
RAB28-205ENST00000508274 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 RNF125Q96EQ8 232 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 SLC25A21Q9BQT8 299 aaPredicted RBP10.4□□□□□ -0.74
RAB28-205ENST00000508274 PBDC1Q9BVG4 233 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 SRRQ9GZT4 340 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 KMT2AQ03164 3969 aa10.4□□□□□ -0.74
RAB28-205ENST00000508274 ZFP92A6NM28 416 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 EIF2B2P49770 351 aaKnown RBP10.39□□□□□ -0.75
RAB28-205ENST00000508274 SIGLEC15Q6ZMC9 328 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 CENPSQ8N2Z9 138 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 SLC35E1Q96K37 410 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 MAGT1Q9H0U3 335 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 PAIP2BQ9ULR5 123 aaKnown RBP10.39□□□□□ -0.75
RAB28-205ENST00000508274 HOXB5P09067 269 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 SPP1P10451 314 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 BAK1Q16611 211 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 SPANXN2Q5MJ10 180 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 GSG1LQ6UXU4 331 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 Q8NAQ8 132 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 C11orf45Q8TAV5 145 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 DEDD2Q8WXF8 326 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 RAB40CQ96S21 281 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 FBXL17Q9UF56 701 aa10.39□□□□□ -0.75
RAB28-205ENST00000508274 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
RAB28-205ENST00000508274 IGKV1OR2-108A0A075B7D4 117 aa10.38□□□□□ -0.75
RAB28-205ENST00000508274 SLC25A6P12236 298 aa10.38□□□□□ -0.75
RAB28-205ENST00000508274 GPX4P36969 197 aaPredicted RBP10.38□□□□□ -0.75
RAB28-205ENST00000508274 AP2S1P53680 142 aaPredicted RBP10.38□□□□□ -0.75
RAB28-205ENST00000508274 LYZP61626 148 aa10.38□□□□□ -0.75
RAB28-205ENST00000508274 OR2F1Q13607 317 aa10.38□□□□□ -0.75
RAB28-205ENST00000508274 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
RAB28-205ENST00000508274 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
RAB28-205ENST00000508274 ZNF701M0R085 212 aaPredicted RBP10.37□□□□□ -0.75
RAB28-205ENST00000508274 WRBO00258 174 aa10.37□□□□□ -0.75
RAB28-205ENST00000508274 ATP5IP56385 69 aaPredicted RBP10.37□□□□□ -0.75
RAB28-205ENST00000508274 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
RAB28-205ENST00000508274 SDHCQ99643 169 aaPredicted RBP10.37□□□□□ -0.75
RAB28-205ENST00000508274 FLVCR2Q9UPI3 526 aa10.37□□□□□ -0.75
RAB28-205ENST00000508274 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
RAB28-205ENST00000508274 IGHV4-28A0A0C4DH34 117 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 LINC00854A0A1B0GVQ3 168 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 PRSS46E5RG02 174 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 H3BP45 60 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 SYNGR2O43760 224 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 ADAP1O75689 374 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
RAB28-205ENST00000508274 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 DEFB1P60022 68 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
RAB28-205ENST00000508274 RAB11AP62491 216 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 RBMY1FQ15415 496 aaKnown RBP10.36□□□□□ -0.75
RAB28-205ENST00000508274 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
RAB28-205ENST00000508274 FRAS1Q86XX4 4008 aa10.36□□□□□ -0.75
RAB28-205ENST00000508274 C9orf170A2RU37 121 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 MED6O75586 246 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 NDUFB6O95139 128 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 TRGV9Q99603 122 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 MFFQ9GZY8 342 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 X6R8D5 127 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 ZNF705EA8MWA4 302 aaPredicted RBP10.35□□□□□ -0.75
RAB28-205ENST00000508274 H3BMM0 161 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 BTCP35070 178 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 INPP1P49441 399 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 TMEM41BQ5BJD5 291 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 TRIQKQ629K1 86 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 THAP8Q8NA92 274 aa10.35□□□□□ -0.75
RAB28-205ENST00000508274 CIB3Q96Q77 187 aaPredicted RBP10.35□□□□□ -0.75
RAB28-205ENST00000508274 SNRPGP15A8MWD9 76 aa10.34□□□□□ -0.75
RAB28-205ENST00000508274 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
RAB28-205ENST00000508274 UBE2MP61081 183 aaKnown RBP10.34□□□□□ -0.75
RAB28-205ENST00000508274 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
RAB28-205ENST00000508274 NDUFA13Q9P0J0 144 aa10.34□□□□□ -0.75
RAB28-205ENST00000508274 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
RAB28-205ENST00000508274 SOCS3O14543 225 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms