RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 HMSDA8MTL9 139 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 C17orf112F2Z3M2 114 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 SAP30O75446 220 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 NPPCP23582 126 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 CLINT1Q14677 625 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 Q5BKY6 102 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 PXDC1Q5TGL8 231 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 DYNLRB2Q8TF09 96 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 RNF24Q9Y225 148 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 WDR83OSQ9Y284 106 aa15.33■□□□□ 0.04
USP53-203ENST00000507597 IGKV1D-37A0A075B6S9 117 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 TAAR5O14804 337 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 IL4P05112 153 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 CAMLGP49069 296 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 OR2F1Q13607 317 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 BTNL8Q6UX41 500 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 ST6GAL2Q96JF0 529 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 MFFQ9GZY8 342 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 TECRQ9NZ01 308 aaKnown RBP15.32■□□□□ 0.04
USP53-203ENST00000507597 RABAC1Q9UI14 185 aa15.32■□□□□ 0.04
USP53-203ENST00000507597 C2orf70A6NJV1 201 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 AGPAT2O15120 278 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 ARPC5O15511 151 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 CD5P06127 495 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 FGF7P21781 194 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 ZNF90Q03938 601 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 UNQ9165/PRO28630Q6UXU0 137 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 Q6ZRG5 221 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 RNF125Q96EQ8 232 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 GRAMD2BQ96HH9 432 aa15.31■□□□□ 0.04
USP53-203ENST00000507597 LSM4Q9Y4Z0 139 aaKnown RBP15.31■□□□□ 0.04
USP53-203ENST00000507597 IGKV1OR2-108A0A075B7D4 117 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 BORCS7-ASMTA0A0B4J1R7 106 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 A0A0D9SG52 128 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 CSN3P07498 182 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 HNRNPCP07910 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
USP53-203ENST00000507597 FOLR2P14207 255 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 CBLN1P23435 193 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 TM4SF20Q53R12 229 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 OR2K2Q8NGT1 345 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 HYLS1Q96M11 299 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 PBDC1Q9BVG4 233 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 PARD6GQ9BYG4 376 aaPredicted RBP15.3■□□□□ 0.04
USP53-203ENST00000507597 SMIM3Q9BZL3 60 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 ZFAND3Q9H8U3 227 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 SLC45A2Q9UMX9 530 aa15.3■□□□□ 0.04
USP53-203ENST00000507597 ANK2Q01484 3957 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 WI2-2373I1.2A0A1W2PRP0 233 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 TMEM213A2RRL7 107 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 C1QBP02746 253 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 IGLL1P15814 213 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 RPL29P47914 159 aaKnown RBP15.29■□□□□ 0.04
USP53-203ENST00000507597 EIF2B2P49770 351 aaKnown RBP15.29■□□□□ 0.04
USP53-203ENST00000507597 LYZP61626 148 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 ZNF345Q14585 488 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 LAMTOR1Q6IAA8 161 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 PPP1R14BQ96C90 147 aa15.29■□□□□ 0.04
USP53-203ENST00000507597 WDR61Q9GZS3 305 aaKnown RBP15.29■□□□□ 0.04
USP53-203ENST00000507597 IGHV7-4-1A0A0J9YVY3 117 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 A0A1B0GVG6 124 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 SMLR1H3BR10 107 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 C8orf88P0DMB2 117 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 OR1L4Q8NGR5 311 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 FBXL17Q9UF56 701 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 SMPXQ9UHP9 88 aa15.28■□□□□ 0.04
USP53-203ENST00000507597 ELOA3CA0A087WX78 387 aaPredicted RBP15.27■□□□□ 0.04
USP53-203ENST00000507597 G3V3Q6 166 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 HYPMO75409 117 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 LINC00869P0C866 280 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 C4BPBP20851 252 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 CRYBB3P26998 211 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 MGST2Q99735 147 aa15.27■□□□□ 0.04
USP53-203ENST00000507597 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 ZNF207O43670 478 aaKnown RBP15.26■□□□□ 0.03
USP53-203ENST00000507597 JTBO76095 146 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 ORM2P19652 201 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 PLP1P60201 277 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 LCN12Q6JVE5 192 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 PFDN5Q99471 154 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 NEURL2Q9BR09 285 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 RHPN1-AS1Q9BWJ2 59 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 GGTLC1Q9BX51 225 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 NPCDR1Q9BY65 106 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 WNK1Q9H4A3 2382 aa15.26■□□□□ 0.03
USP53-203ENST00000507597 IGHV3OR16-8A0A075B7F1 116 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 TRAV25A0A0B4J276 109 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 KANTRA0A1W2PQU2 76 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 WIPF1O43516 503 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 B2MP61769 119 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 EIF5AP63241 154 aaKnown RBP15.25■□□□□ 0.03
USP53-203ENST00000507597 OPCMLQ14982 345 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 ZFP69Q49AA0 526 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 IL34Q6ZMJ4 242 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 RBPMS2Q6ZRY4 209 aaKnown RBP15.25■□□□□ 0.03
USP53-203ENST00000507597 KCNRGQ8N5I3 272 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 OR1B1Q8NGR6 318 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 ARPC5LQ9BPX5 153 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 ARL6Q9H0F7 186 aa15.25■□□□□ 0.03
USP53-203ENST00000507597 COX7A2P2O60397 106 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 PFDN1O60925 122 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms