RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 A0A1B0GVG6 124 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 FABP1P07148 127 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 KPRPQ5T749 579 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-210ENST00000506767 TMEM182Q6ZP80 229 aaPredicted RBP9.73□□□□□ -0.85
TCOF1-210ENST00000506767 LILRB2Q8N423 598 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 OR51G1Q8NGK1 321 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 ST6GAL2Q96JF0 529 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 AQP10Q96PS8 301 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
TCOF1-210ENST00000506767 IGHV7-4-1A0A0J9YVY3 117 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
TCOF1-210ENST00000506767 CFDP00746 253 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-210ENST00000506767 IL4P05112 153 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 CRYBB3P26998 211 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 USF2Q15853 346 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-210ENST00000506767 DEFB114Q30KQ6 69 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 BEAN1Q3B7T3 259 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 CYP2G1PQ6ZSU1 146 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 MGST2Q99735 147 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
TCOF1-210ENST00000506767 MLXQ9UH92 298 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 U3KQE9 123 aa9.72□□□□□ -0.85
TCOF1-210ENST00000506767 hCG_2014768A0A024R1R8 64 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 RNF222A6NCQ9 220 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 CHEK1O14757 476 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 AGPAT2O15120 278 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.86
TCOF1-210ENST00000506767 NPPCP23582 126 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 GATA2P23769 480 aaPredicted RBP9.71□□□□□ -0.86
TCOF1-210ENST00000506767 PLP1P60201 277 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 SELENOTP62341 195 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 OR2F1Q13607 317 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 BTNL8Q6UX41 500 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 OR2K2Q8NGT1 345 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 RNF125Q96EQ8 232 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 ATP5SQ99766 215 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 VSIRQ9H7M9 311 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 SLC45A2Q9UMX9 530 aa9.71□□□□□ -0.86
TCOF1-210ENST00000506767 FXYD6-FXYD2A0A087WZ82 144 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 UBE2L5PA0A1B0GUS4 154 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 MPDU1O75352 247 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 KRTAP10-11P60412 298 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 DEFA6Q01524 100 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 CLINT1Q14677 625 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 TCTE3Q8IZS6 198 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 BPIFCQ8NFQ6 507 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 OR11H4Q8NGC9 324 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 METTL26Q96S19 204 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 WFDC1Q9HC57 220 aa9.7□□□□□ -0.86
TCOF1-210ENST00000506767 DFFBO76075 338 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 HNRNPCP07910 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 LINC00869P0C866 280 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 FGF7P21781 194 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 NUP62P37198 522 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 CAMLGP49069 296 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PRR20EP86478 221 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PRR20CP86479 221 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PRR20DP86480 221 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PRR20BP86481 221 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PRR20AP86496 221 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 RAB31Q13636 194 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 CD300EQ496F6 205 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 STPG3Q8N7X2 389 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 INO80EQ8NBZ0 244 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 DYNLRB2Q8TF09 96 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 NEURL2Q9BR09 285 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 GGTLC1Q9BX51 225 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 PARD6GQ9BYG4 376 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 SMIM3Q9BZL3 60 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 WDR61Q9GZS3 305 aaKnown RBP9.69□□□□□ -0.86
TCOF1-210ENST00000506767 RABAC1Q9UI14 185 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 DNAH3Q8TD57 4116 aa9.69□□□□□ -0.86
TCOF1-210ENST00000506767 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 IZUMO1RA6ND01 250 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 HMSDA8MTL9 139 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 BUB3O43684 328 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 RPL29P47914 159 aaKnown RBP9.68□□□□□ -0.86
TCOF1-210ENST00000506767 EIF2B2P49770 351 aaKnown RBP9.68□□□□□ -0.86
TCOF1-210ENST00000506767 LYZP61626 148 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 OPCMLQ14982 345 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 RNF2Q99496 336 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 ZMAT5Q9UDW3 170 aaKnown RBP9.68□□□□□ -0.86
TCOF1-210ENST00000506767 FBXL17Q9UF56 701 aa9.68□□□□□ -0.86
TCOF1-210ENST00000506767 IGHV3OR16-13A0A075B7E8 117 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 IGHV3-74A0A0B4J1X5 117 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 A0A1W2PS18 150 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 ZNF785A8K8V0 405 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 ARPC5O15511 151 aa9.67□□□□□ -0.86
TCOF1-210ENST00000506767 BMI1P35226 326 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms