RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PDZD11Q5EBL8 140 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 LINC01551Q86U37 167 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 FANCD2OSQ96PS1 177 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 SPOCK3Q9BQ16 436 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 PDE6DO43924 150 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BKO60814 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 TRGC2P03986 189 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BJP06899 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BOP23527 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 CRYBB3P26998 211 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BBP33778 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 CDX1P47902 265 aaPredicted RBP9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BDP58876 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BCP62807 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 PAX8Q06710 450 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
LIN54-206ENST00000506560 CLEC2AQ6UVW9 174 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 APCP25054 2843 aa9.62□□□□□ -0.87
LIN54-206ENST00000506560 PSG1P11464 419 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 SUMO1P63165 101 aaKnown RBP9.61□□□□□ -0.87
LIN54-206ENST00000506560 UBE2L3P68036 154 aaKnown RBP9.61□□□□□ -0.87
LIN54-206ENST00000506560 C9orf152Q5JTZ5 239 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 AVPP01185 164 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 ETFRF1Q6IPR1 90 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 TRGV9Q99603 122 aa9.61□□□□□ -0.87
LIN54-206ENST00000506560 LYZP61626 148 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 PQLC2Q6ZP29 291 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 LURAP1LQ8IV03 231 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 MRPL41Q8IXM3 137 aaKnown RBP9.6□□□□□ -0.87
LIN54-206ENST00000506560 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 RBM14Q96PK6 669 aaKnown RBP9.6□□□□□ -0.87
LIN54-206ENST00000506560 TBL2Q9Y4P3 447 aaKnown RBP9.6□□□□□ -0.87
LIN54-206ENST00000506560 CCDC168Q8NDH2 2452 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 B4DEV8 164 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 CLDN34H7C241 214 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 K7EN84 100 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 GPR61Q9BZJ8 451 aa9.6□□□□□ -0.87
LIN54-206ENST00000506560 A0A0U1RQK1 487 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 F8W735 103 aaPredicted RBP9.59□□□□□ -0.87
LIN54-206ENST00000506560 BLNKQ8WV28 456 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 PAXXQ9BUH6 204 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 GAR1Q9NY12 217 aaKnown RBP9.59□□□□□ -0.87
LIN54-206ENST00000506560 CREBBPQ92793 2442 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 F6UZH7 168 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 G3V318 75 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 OR2J3O76001 311 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 S100A2P29034 98 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 TAS2R45P59539 299 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 SELENOTP62341 195 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 ECSCRQ19T08 205 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 MRPL32Q9BYC8 188 aaKnown RBP9.59□□□□□ -0.87
LIN54-206ENST00000506560 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 POLR3KQ9Y2Y1 108 aaPredicted RBP9.59□□□□□ -0.87
LIN54-206ENST00000506560 TEX15Q9BXT5 2789 aa9.59□□□□□ -0.87
LIN54-206ENST00000506560 CORTO00230 105 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 NDUFB8O95169 186 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 OR5I1Q13606 314 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 C22orf15Q8WYQ4 148 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 FRZBQ92765 325 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 SGK494Q96LW2 274 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
LIN54-206ENST00000506560 IGLV11-55A0A075B6I3 123 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 IGHV3OR16-8A0A075B7F1 116 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 IGHV3-35A0A0C4DH35 117 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 CXorf65A6NEN9 183 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 FAM3BP58499 235 aaPredicted RBP9.58□□□□□ -0.88
LIN54-206ENST00000506560 BPIFB3P59826 476 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 GNG5P63218 68 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 FAM210BQ96KR6 192 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 PFDN5Q99471 154 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 C19orf24Q9BVV8 132 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 MXRA5Q9NR99 2828 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 H7BYZ3 331 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 PFN1P07737 140 aaKnown RBP9.58□□□□□ -0.88
LIN54-206ENST00000506560 TRGC1P0CF51 173 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 COX6B1P14854 86 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
LIN54-206ENST00000506560 HIST2H2BCQ6DN03 193 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 NHLRC2Q8NBF2 726 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 OR1L4Q8NGR5 311 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 RASL11BQ9BPW5 248 aa9.58□□□□□ -0.88
LIN54-206ENST00000506560 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
LIN54-206ENST00000506560 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms