RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 KIR2DL5BQ8NHK3 375 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 NUDT15Q9NV35 164 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 STRAPQ9Y3F4 350 aaKnown RBP11.5□□□□□ -0.57
MED28-204ENST00000506409 IGKV1D-37A0A075B6S9 117 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 HELTA6NFD8 242 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 UBE2CO00762 179 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 FABP1P07148 127 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 ZNF90Q03938 601 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
MED28-204ENST00000506409 Q6ZWC4 215 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 OVOL2Q9BRP0 275 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 PBDC1Q9BVG4 233 aa11.49□□□□□ -0.57
MED28-204ENST00000506409 PRSS46E5RG02 174 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 K7EQG2 157 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 SSSCA1O60232 199 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 SCGB1D2O95969 90 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 AP2S1P53680 142 aaPredicted RBP11.48□□□□□ -0.57
MED28-204ENST00000506409 DEFB131AP59861 70 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 C16orf54Q6UWD8 224 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 FAM24BQ8N5W8 94 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 PTTG2Q9NZH5 202 aa11.48□□□□□ -0.57
MED28-204ENST00000506409 FAM240BA0A1B0GVZ2 78 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 BUB3O43684 328 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 NUP62P37198 522 aaPredicted RBP11.47□□□□□ -0.57
MED28-204ENST00000506409 LEMD1Q68G75 181 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 MZT2BQ6NZ67 158 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 THAP8Q8NA92 274 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 ZBTB8BQ8NAP8 495 aaPredicted RBP11.47□□□□□ -0.57
MED28-204ENST00000506409 DCANP1Q8TF63 244 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 TRGV9Q99603 122 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 WDR12Q9GZL7 423 aaKnown RBP11.47□□□□□ -0.57
MED28-204ENST00000506409 PSENENQ9NZ42 101 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 GSKIPQ9P0R6 139 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 PFDN2Q9UHV9 154 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 TBC1D24Q9ULP9 559 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
MED28-204ENST00000506409 IGKV1OR2-108A0A075B7D4 117 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 SNRPGP15A8MWD9 76 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 SPRY2O43597 315 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 H2AFB2P0C5Z0 115 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 LYZP61626 148 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 AKR1C1Q04828 323 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 OR2F1Q13607 317 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 OR8G2PQ6IF36 304 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 SIGLEC15Q6ZMC9 328 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 ZNF431Q8TF32 576 aaPredicted RBP11.46□□□□□ -0.57
MED28-204ENST00000506409 SMIM8Q96KF7 97 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
MED28-204ENST00000506409 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
MED28-204ENST00000506409 CCSO14618 274 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 ZNF688P0C7X2 276 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 ASAH1Q13510 395 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 ZNF846Q147U1 533 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 RAB40CQ96S21 281 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
MED28-204ENST00000506409 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 UPK1BO75841 260 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 PAX9P55771 341 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 STHQ8IWL8 128 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 IL17DQ8TAD2 202 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 RNF183Q96D59 192 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 NRN1Q9NPD7 142 aa11.44□□□□□ -0.58
MED28-204ENST00000506409 RCL1Q9Y2P8 373 aaKnown RBP11.44□□□□□ -0.58
MED28-204ENST00000506409 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 TSC22D2O75157 780 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 CFDP00746 253 aaPredicted RBP11.43□□□□□ -0.58
MED28-204ENST00000506409 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 TAS2R30P59541 319 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
MED28-204ENST00000506409 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 DNAH7Q8WXX0 4024 aa11.43□□□□□ -0.58
MED28-204ENST00000506409 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 CCNKO75909 580 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 MBPP02686 304 aaPredicted RBP11.42□□□□□ -0.58
MED28-204ENST00000506409 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
MED28-204ENST00000506409 PSMG4Q5JS54 123 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 TMEM144Q7Z5S9 345 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 OR10P1Q8NGE3 313 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 ENKURQ8TC29 256 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 FBXL17Q9UF56 701 aa11.42□□□□□ -0.58
MED28-204ENST00000506409 A0A0J9YWU9 116 aa11.41□□□□□ -0.58
MED28-204ENST00000506409 C7orf66A4D0T2 115 aa11.41□□□□□ -0.58
MED28-204ENST00000506409 CA1P00915 261 aaPredicted RBP11.41□□□□□ -0.58
MED28-204ENST00000506409 GATA2P23769 480 aaPredicted RBP11.41□□□□□ -0.58
MED28-204ENST00000506409 RRAS2P62070 204 aaPredicted RBP11.41□□□□□ -0.58
MED28-204ENST00000506409 DLK1P80370 383 aa11.41□□□□□ -0.58
MED28-204ENST00000506409 C1orf194Q5T5A4 169 aa11.41□□□□□ -0.58
MED28-204ENST00000506409 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
MED28-204ENST00000506409 L7N2F9 121 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms