RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-210ENST00000505589 IGHV3-74A0A0B4J1X5 117 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 PFDN1O60925 122 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 OR4E1P0C645 316 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 GNRHRP30968 328 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 SNRPD3P62318 126 aaKnown RBP7.14□□□□□ -1.27
NEDD9-210ENST00000505589 C4orf46Q504U0 113 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 ZFAND1Q8TCF1 268 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 PINX1Q96BK5 328 aaKnown RBP7.14□□□□□ -1.27
NEDD9-210ENST00000505589 ZNF486Q96H40 463 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-210ENST00000505589 NEU1Q99519 415 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 SEC22CQ9BRL7 303 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 RTBDNQ9BSG5 229 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-210ENST00000505589 X6R8D5 127 aa7.14□□□□□ -1.27
NEDD9-210ENST00000505589 TRAV30A0A087WSZ9 112 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 K7EQG2 157 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 SSNA1O43805 119 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 PGLYRP1O75594 196 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-210ENST00000505589 TMEM50AO95807 157 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 AKR1C4P17516 323 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 PI3P19957 117 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 HSPE1P61604 102 aaKnown RBP7.13□□□□□ -1.27
NEDD9-210ENST00000505589 RRAS2P62070 204 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-210ENST00000505589 DHODHQ02127 395 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 DHRS2Q13268 280 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 PPP1R1AQ13522 171 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 TMEM128Q5BJH2 165 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 Q6ZRM9 215 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 H2BFWTQ7Z2G1 175 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 AKAP14Q86UN6 197 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 CSNK1G2-AS1Q8NCQ2 148 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 STXBP6Q8NFX7 210 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 ZNF431Q8TF32 576 aaPredicted RBP7.13□□□□□ -1.27
NEDD9-210ENST00000505589 TMEM230Q96A57 120 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 MED28Q9H204 178 aa7.13□□□□□ -1.27
NEDD9-210ENST00000505589 PUS1Q9Y606 427 aaKnown RBP eCLIP7.13□□□□□ -1.27
NEDD9-210ENST00000505589 C9orf170A2RU37 121 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 CRYM-AS1A6NIL9 109 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 GPR31O00270 319 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 ATG12O94817 140 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 GIG44P09565 113 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-210ENST00000505589 SULT1A3P0DMM9 295 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 SULT1A4P0DMN0 295 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 VAMP1P23763 118 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 CRYBB3P26998 211 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 G6PCP35575 357 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 RND3P61587 244 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 SUPT4H1P63272 117 aaKnown RBP7.12□□□□□ -1.27
NEDD9-210ENST00000505589 PRCDQ00LT1 54 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 Q6ZR54 194 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 CCDC71LQ8N9Z2 235 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 RAB40CQ96S21 281 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 NSG2Q9Y328 171 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 TMED3Q9Y3Q3 217 aa7.12□□□□□ -1.27
NEDD9-210ENST00000505589 ZNF688P0C7X2 276 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 PIGPP57054 158 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 FCN2Q15485 313 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 PHLDA2Q53GA4 152 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 LILRB2Q8N423 598 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 C12orf45Q8N5I9 185 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-210ENST00000505589 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 MITD1Q8WV92 249 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 PDCD10Q9BUL8 212 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 NAA60Q9H7X0 242 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 PFDN2Q9UHV9 154 aa7.11□□□□□ -1.27
NEDD9-210ENST00000505589 IGLV2-18A0A075B6J9 118 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 A0A0B4J2A0 478 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 IGHV3-66A0A0C4DH42 116 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 TEX13DA0A0J9YY54 714 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-210ENST00000505589 INS-IGF2F8WCM5 200 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 CLN5O75503 358 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 CCNKO75909 580 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 SFT2D2O95562 160 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 APOHP02749 345 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-210ENST00000505589 ANXA3P12429 323 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 P2RY1P47900 373 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 Q8N1X5 172 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 OR11H7Q8NGC8 314 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 Q8WTZ3 238 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 PPP1R14BQ96C90 147 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 NIPSNAP3BQ9BS92 247 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 ATG101Q9BSB4 218 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 ENY2Q9NPA8 101 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 CLEC5AQ9NY25 188 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 MGAT4CQ9UBM8 478 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 SHPKQ9UHJ6 478 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 RFNGQ9Y644 331 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 HSPG2P98160 4391 aa7.1□□□□□ -1.27
NEDD9-210ENST00000505589 RPS10-NUDT3A0A1W2PQS6 291 aa7.09□□□□□ -1.27
NEDD9-210ENST00000505589 KNCNA6PVL3 124 aa7.09□□□□□ -1.27
NEDD9-210ENST00000505589 CXCL3P19876 107 aa7.09□□□□□ -1.27
NEDD9-210ENST00000505589 C4BPBP20851 252 aa7.09□□□□□ -1.27
NEDD9-210ENST00000505589 CD300CQ08708 224 aa7.09□□□□□ -1.27
NEDD9-210ENST00000505589 PSMG4Q5JS54 123 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms