RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TMED4Q7Z7H5 227 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 OR51G1Q8NGK1 321 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 DTD1Q8TEA8 209 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 FBXL17Q9UF56 701 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 SHPKQ9UHJ6 478 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 IGKV1OR2-108A0A075B7D4 117 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 TRAV30A0A087WSZ9 112 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
DDX41-204ENST00000504807 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 A0A1W2PS18 150 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 FAM90A26D6RGX4 464 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 IFNA10P01566 189 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 CD5P06127 495 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 CCR6P51684 374 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 DHRS2Q13268 280 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 GAMTQ14353 236 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 GDF5OSQ5U4N7 250 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 STHQ8IWL8 128 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 C11orf45Q8TAV5 145 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 Q8WTZ3 238 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 C17orf77Q96MU5 243 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 RAB40CQ96S21 281 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 TMEM231Q9H6L2 316 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 SCP2D1Q9UJQ7 156 aa9.5□□□□□ -0.89
DDX41-204ENST00000504807 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 RD3LP0DJH9 198 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 IAPPP10997 89 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 PPP1R1AQ13522 171 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 CCDC190Q86UF4 302 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 LGI3Q8N145 548 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 WDR12Q9GZL7 423 aaKnown RBP9.49□□□□□ -0.89
DDX41-204ENST00000504807 RABL2AQ9UBK7 228 aaPredicted RBP9.49□□□□□ -0.89
DDX41-204ENST00000504807 CELA1Q9UNI1 258 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 RABL2BQ9UNT1 228 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 KCNIP3Q9Y2W7 256 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 PKD1P98161 4303 aa9.49□□□□□ -0.89
DDX41-204ENST00000504807 ZNF705EA8MWA4 302 aaPredicted RBP9.48□□□□□ -0.89
DDX41-204ENST00000504807 PYDC2Q56P42 97 aa9.48□□□□□ -0.89
DDX41-204ENST00000504807 TMEM182Q6ZP80 229 aaPredicted RBP9.48□□□□□ -0.89
DDX41-204ENST00000504807 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
DDX41-204ENST00000504807 TMEM217Q8N7C4 229 aa9.48□□□□□ -0.89
DDX41-204ENST00000504807 HELTA6NFD8 242 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 SOCS3O14543 225 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 OR2F1Q13607 317 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 ZNF767PQ75MW2 155 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 LRTM2Q8N967 370 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 OR1S1Q8NH92 325 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 RNF125Q96EQ8 232 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 SDHCQ99643 169 aaPredicted RBP9.47□□□□□ -0.89
DDX41-204ENST00000504807 PBDC1Q9BVG4 233 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 MAGT1Q9H0U3 335 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 NRN1Q9NPD7 142 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 U3KQ87 197 aa9.47□□□□□ -0.89
DDX41-204ENST00000504807 H3BMM0 161 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 SFT2D2O95562 160 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 IFNA4P05014 189 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 SPP1P10451 314 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 VAMP1P23763 118 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 BAK1Q16611 211 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 TMEM128Q5BJH2 165 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 ETFRF1Q6IPR1 90 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 SIGLEC15Q6ZMC9 328 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 Q6ZTC4 211 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 SRRQ9GZT4 340 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 FLVCR2Q9UPI3 526 aa9.46□□□□□ -0.9
DDX41-204ENST00000504807 DMBT1Q9UGM3 2413 aaPredicted RBP9.45□□□□□ -0.9
DDX41-204ENST00000504807 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
DDX41-204ENST00000504807 ADAP1O75689 374 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
DDX41-204ENST00000504807 HLA-DMBP28068 263 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 BTCP35070 178 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
DDX41-204ENST00000504807 FXYD7P58549 80 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 MORN3Q6PF18 240 aaPredicted RBP9.45□□□□□ -0.9
DDX41-204ENST00000504807 C20orf173Q96LM9 149 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 SCGB3A2Q96PL1 93 aa9.45□□□□□ -0.9
DDX41-204ENST00000504807 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 F6UB75 175 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 H3BP45 60 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 HOXB5P09067 269 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
DDX41-204ENST00000504807 LYZP61626 148 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 SRPXP78539 464 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 GGNBP1Q5YKI7 109 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 NARS2Q96I59 477 aaKnown RBP9.44□□□□□ -0.9
DDX41-204ENST00000504807 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
DDX41-204ENST00000504807 DUXBA0A1W2PPF3 345 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 CCDC160A6NGH7 325 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 WRBO00258 174 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 CCNKO75909 580 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 ANXA3P12429 323 aa9.43□□□□□ -0.9
DDX41-204ENST00000504807 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms