RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 NUDT11Q96G61 164 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 FAM181BA6NEQ2 426 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 LYNX1G3V0Z9 82 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 LYNX1P0DP58 116 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 MGST2Q99735 147 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 HAX1O00165 279 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 TNFSF13O75888 250 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 TRAV5A0A0B4J249 113 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 RNASE4P34096 147 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 LY96Q9Y6Y9 160 aa13.3□□□□□ -0.28
HMGXB3-202ENST00000503427 Q6P435 159 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 RASL11AQ6T310 242 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 CA1P00915 261 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 FAM71F2Q6NXP2 309 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 C2orf88Q9BSF0 95 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 ALKBH7Q9BT30 221 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 E9PQ18 207 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 NDUFA3O95167 84 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 DNAL4O96015 105 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 SPATA31B1PQ5VZV4 182 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 CD177Q8N6Q3 437 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 TIMM23O14925 209 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 DSCR9P59020 149 aa13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 SEPSECSQ9HD40 501 aaKnown RBP13.29□□□□□ -0.28
HMGXB3-202ENST00000503427 TMEM178BH3BS89 294 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 EFNA4P52798 201 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 JKAMPQ9P055 326 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 H3BUT2 72 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 COQ2Q96H96 371 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 ROS1P08922 2347 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 PLXNA2O75051 1894 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 PSMB11A5LHX3 300 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 CACNG7P62955 275 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 RHOGP84095 191 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
HMGXB3-202ENST00000503427 MYLKQ15746 1914 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 H3BRM9 83 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 PLAURQ03405 335 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 TMEM101Q96IK0 257 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 SELLP14151 372 aa13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.28
HMGXB3-202ENST00000503427 NOTCH4Q99466 2003 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 TRAV21A0A0B4J279 112 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 F2Z2F3 143 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 DPM2O94777 84 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 PRB3Q04118 309 aaPredicted RBP13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 C20orf204Q6ZNR8 217 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 DERL1Q9BUN8 251 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 ADCYAP1P18509 176 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 EMP1P54849 157 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 DUX3Q96PT4 197 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 MPDZO75970 2070 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 AKAP6Q13023 2319 aa13.27□□□□□ -0.29
HMGXB3-202ENST00000503427 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 NPFFR1Q9GZQ6 430 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 APOMO95445 188 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 IGHV3-11P01762 117 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 K7ENP7 123 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 CD24P25063 80 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 C1orf194Q5T5A4 169 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 ZNF474Q6S9Z5 364 aaPredicted RBP13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 IGFL3Q6UXB1 125 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 TMEM8BA6NDV4 472 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 MYOD1P15172 320 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 MS4A6AQ9H2W1 248 aa13.26□□□□□ -0.29
HMGXB3-202ENST00000503427 TRAV3A0A0B4J244 114 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 LINC00473A8K010 186 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 ORMDL2Q53FV1 153 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 VOPP1Q96AW1 172 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 TRGV9Q99603 122 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 RNF5Q99942 180 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 IGHV2-26A0A0B4J1V2 119 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 LILRA1O75019 489 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 FBLN7Q53RD9 439 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 IFI27L1Q96BM0 104 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 PF4P02776 101 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 MBNL3Q9NUK0 354 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-202ENST00000503427 OOSP1A8MZH6 123 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 NTF4P34130 210 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 PRSS33Q8NF86 280 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 A0A0G2JRQ6 117 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 A0A1B0GV72 72 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 VCX2Q9H322 139 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
HMGXB3-202ENST00000503427 PSG1P11464 419 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms