RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 BPIFCQ8NFQ6 507 aa15.66■□□□□ 0.1
CDC42SE2-206ENST00000503291 PUS1Q9Y606 427 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDC42SE2-206ENST00000503291 YIF1AO95070 293 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 ZP3P21754 424 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 ATP6V0CP27449 155 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 HOXD3P31249 432 aaPredicted RBP15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 SELENOTP62341 195 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 MIC13Q5XKP0 118 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 ARV1Q9H2C2 271 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 RPL29P47914 159 aaKnown RBP15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 SLC51BQ86UW2 128 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 OR51G1Q8NGK1 321 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 GINS3Q9BRX5 216 aa15.65■□□□□ 0.1
CDC42SE2-206ENST00000503291 C17orf112F2Z3M2 114 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 SHISA2Q6UWI4 295 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 TOMM20LQ6UXN7 152 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 GPHB5Q86YW7 130 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 STPG3Q8N7X2 389 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 SH3BGRL3Q9H299 93 aa15.64■□□□□ 0.09
CDC42SE2-206ENST00000503291 LINC00869P0C866 280 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 SLURP1P55000 103 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 EIF5AP63241 154 aaKnown RBP15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PRR20EP86478 221 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PRR20CP86479 221 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PRR20DP86480 221 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PRR20BP86481 221 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PRR20AP86496 221 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 FHL3Q13643 280 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 BAP18Q8IXM2 172 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 RCC1LQ96I51 464 aaKnown RBP15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 PXMP4Q9Y6I8 212 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 IGHV3OR16-8A0A075B7F1 116 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 NDUFA4O00483 81 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 TPT1P13693 172 aaKnown RBP15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 FAM106AQ4KMX7 169 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 UNQ9165/PRO28630Q6UXU0 137 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 STOML3Q8TAV4 291 aa15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 GNPNAT1Q96EK6 184 aaPredicted RBP15.63■□□□□ 0.09
CDC42SE2-206ENST00000503291 ZNF320A2RRD8 509 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 IL4P05112 153 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 B2MP61769 119 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 SLC25A32Q9H2D1 315 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 SLC39A9Q9NUM3 307 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 TIMM9Q9Y5J7 89 aa15.62■□□□□ 0.09
CDC42SE2-206ENST00000503291 KLF5Q13887 457 aaPredicted RBP15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 ZFAND3Q9H8U3 227 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 WI2-2373I1.2A0A1W2PRP0 233 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 CFDP00746 253 aaPredicted RBP15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 MYCNOSP40205 109 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 SYNJ2BPP57105 145 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 Q6ZRG5 221 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 ST8SIA2Q92186 375 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 PSMG3Q9BT73 122 aaPredicted RBP15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 C20orf24Q9BUV8 137 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 KCNIP2Q9NS61 270 aa15.61■□□□□ 0.09
CDC42SE2-206ENST00000503291 WNK1Q9H4A3 2382 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 TSPAN15O95858 294 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 SPP1P10451 314 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 ORM2P19652 201 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 LYZP61626 148 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 OR4F17Q8NGA8 305 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 DLX4Q92988 240 aaPredicted RBP15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 RNF125Q96EQ8 232 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 OR4F4Q96R69 305 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 PBDC1Q9BVG4 233 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 USF2Q15853 346 aaPredicted RBP15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 FFAR4Q5NUL3 377 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 OR2G3Q8NGZ4 309 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 TMEM190Q8WZ59 177 aa15.6■□□□□ 0.09
CDC42SE2-206ENST00000503291 PLP1P60201 277 aa15.59■□□□□ 0.09
CDC42SE2-206ENST00000503291 C1QL4Q86Z23 238 aa15.59■□□□□ 0.09
CDC42SE2-206ENST00000503291 OR1B1Q8NGR6 318 aa15.59■□□□□ 0.09
CDC42SE2-206ENST00000503291 DOK5Q9P104 306 aa15.59■□□□□ 0.09
CDC42SE2-206ENST00000503291 ELLP55199 621 aaPredicted RBP15.58■□□□□ 0.09
CDC42SE2-206ENST00000503291 SERF2P84101 59 aa15.58■□□□□ 0.09
CDC42SE2-206ENST00000503291 LGALS9O00182 355 aa15.58■□□□□ 0.08
CDC42SE2-206ENST00000503291 SEC11BP0C7V7 166 aa15.58■□□□□ 0.08
CDC42SE2-206ENST00000503291 GCSAMLQ5JQS6 135 aa15.58■□□□□ 0.08
CDC42SE2-206ENST00000503291 ZNF207O43670 478 aaKnown RBP15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 HYPMO75409 117 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 PF4P02776 101 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 OR5G3P0C626 314 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 REC114Q7Z4M0 266 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 TMED6Q8WW62 240 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 TMEM37Q8WXS4 190 aa15.57■□□□□ 0.08
CDC42SE2-206ENST00000503291 TM4SF20Q53R12 229 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 PXDC1Q5TGL8 231 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 PATE2Q6UY27 113 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 VSIRQ9H7M9 311 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 DNAJC4Q9NNZ3 241 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 MRPL27Q9P0M9 148 aaKnown RBP15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 DAZ1Q9NQZ3 744 aaKnown RBP15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 UFC1Q9Y3C8 167 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 VWFP04275 2813 aa15.56■□□□□ 0.08
CDC42SE2-206ENST00000503291 ELOA3CA0A087WX78 387 aaPredicted RBP15.55■□□□□ 0.08
CDC42SE2-206ENST00000503291 K7EMT4 169 aa15.55■□□□□ 0.08
CDC42SE2-206ENST00000503291 COX7A2P2O60397 106 aa15.55■□□□□ 0.08
CDC42SE2-206ENST00000503291 EIF5AL1Q6IS14 154 aaKnown RBP15.55■□□□□ 0.08
CDC42SE2-206ENST00000503291 UHRF2Q96PU4 802 aa15.55■□□□□ 0.08
CDC42SE2-206ENST00000503291 PLA2G2EQ9NZK7 142 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms