RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 FABP1P07148 127 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 HNRNPCP07910 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC01550-201ENST00000499006 RD3LP0DJH9 198 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 SLURP1P55000 103 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 SELENOTP62341 195 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 RAB31Q13636 194 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 ARV1Q9H2C2 271 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 ZFAND3Q9H8U3 227 aa14.96□□□□□ -0.01
LINC01550-201ENST00000499006 PUS1Q9Y606 427 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC01550-201ENST00000499006 GATA2P23769 480 aaPredicted RBP14.95□□□□□ -0.02
LINC01550-201ENST00000499006 RPL29P47914 159 aaKnown RBP14.95□□□□□ -0.02
LINC01550-201ENST00000499006 PRR20EP86478 221 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 PRR20CP86479 221 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 PRR20DP86480 221 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 PRR20BP86481 221 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 PRR20AP86496 221 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 TOMM20LQ6UXN7 152 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 OR4F17Q8NGA8 305 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 Q8WTZ3 238 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 RCC1LQ96I51 464 aaKnown RBP14.95□□□□□ -0.02
LINC01550-201ENST00000499006 OR4F4Q96R69 305 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 RSG1Q9BU20 258 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 WI2-2373I1.2A0A1W2PRP0 233 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 LINC00869P0C866 280 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 UNQ9165/PRO28630Q6UXU0 137 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 BPIFCQ8NFQ6 507 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
LINC01550-201ENST00000499006 LGALS9O00182 355 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 ATP6V0CP27449 155 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 FAM106AQ4KMX7 169 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 MIC13Q5XKP0 118 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 REC114Q7Z4M0 266 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 C1QL4Q86Z23 238 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 HSD17B11Q8NBQ5 300 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 STOML3Q8TAV4 291 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 TMEM190Q8WZ59 177 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 DLX4Q92988 240 aaPredicted RBP14.94□□□□□ -0.02
LINC01550-201ENST00000499006 GINS3Q9BRX5 216 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 ZNF471Q9BX82 626 aaPredicted RBP14.94□□□□□ -0.02
LINC01550-201ENST00000499006 BOLA1Q9Y3E2 137 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 RFNGQ9Y644 331 aa14.94□□□□□ -0.02
LINC01550-201ENST00000499006 TRRAPQ9Y4A5 3859 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 CFDP00746 253 aaPredicted RBP14.93□□□□□ -0.02
LINC01550-201ENST00000499006 SYNJ2BPP57105 145 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 PLP1P60201 277 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 STPG3Q8N7X2 389 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 TIMM9Q9Y5J7 89 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 PXMP4Q9Y6I8 212 aa14.93□□□□□ -0.02
LINC01550-201ENST00000499006 C17orf112F2Z3M2 114 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 YIF1AO95070 293 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 IL4P05112 153 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 C4BPBP20851 252 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 ZNF709Q8N972 641 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 RNF125Q96EQ8 232 aa14.92□□□□□ -0.02
LINC01550-201ENST00000499006 PSMG3Q9BT73 122 aaPredicted RBP14.92□□□□□ -0.02
LINC01550-201ENST00000499006 IGHV3OR16-8A0A075B7F1 116 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 A8MWP6 167 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 B2MP61769 119 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 USF2Q15853 346 aaPredicted RBP14.91□□□□□ -0.02
LINC01550-201ENST00000499006 SLC51BQ86UW2 128 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 GNPNAT1Q96EK6 184 aaPredicted RBP14.91□□□□□ -0.02
LINC01550-201ENST00000499006 SH3BGRL3Q9H299 93 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 KCNIP2Q9NS61 270 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 SLC39A9Q9NUM3 307 aa14.91□□□□□ -0.02
LINC01550-201ENST00000499006 ZNF320A2RRD8 509 aa14.9□□□□□ -0.02
LINC01550-201ENST00000499006 TSPAN15O95858 294 aa14.9□□□□□ -0.02
LINC01550-201ENST00000499006 PF4P02776 101 aa14.9□□□□□ -0.02
LINC01550-201ENST00000499006 LINC00482Q8N8I6 264 aa14.9□□□□□ -0.02
LINC01550-201ENST00000499006 K7EMT4 169 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 M0QZ24 198 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 SPP1P10451 314 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 ELLP55199 621 aaPredicted RBP14.89□□□□□ -0.03
LINC01550-201ENST00000499006 LYZP61626 148 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 EIF5AP63241 154 aaKnown RBP14.89□□□□□ -0.03
LINC01550-201ENST00000499006 PXDC1Q5TGL8 231 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 BAP18Q8IXM2 172 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 OR2G3Q8NGZ4 309 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 C20orf24Q9BUV8 137 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 MRPL27Q9P0M9 148 aaKnown RBP14.89□□□□□ -0.03
LINC01550-201ENST00000499006 TMEM213A2RRL7 107 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 TPT1P13693 172 aaKnown RBP14.89□□□□□ -0.03
LINC01550-201ENST00000499006 SERF2P84101 59 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 TM4SF20Q53R12 229 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 PATE2Q6UY27 113 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 Q6ZRG5 221 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 OR9G4Q8NGQ1 327 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 SLC25A32Q9H2D1 315 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 DAZ1Q9NQZ3 744 aaKnown RBP14.89□□□□□ -0.03
LINC01550-201ENST00000499006 UFC1Q9Y3C8 167 aa14.89□□□□□ -0.03
LINC01550-201ENST00000499006 OVOL1O14753 267 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 ORM2P19652 201 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 FFAR4Q5NUL3 377 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 IL34Q6ZMJ4 242 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 OR1B1Q8NGR6 318 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 TMEM37Q8WXS4 190 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 ST8SIA2Q92186 375 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 PBDC1Q9BVG4 233 aa14.88□□□□□ -0.03
LINC01550-201ENST00000499006 ZNF207O43670 478 aaKnown RBP14.87□□□□□ -0.03
LINC01550-201ENST00000499006 HYPMO75409 117 aa14.87□□□□□ -0.03
LINC01550-201ENST00000499006 CRYBB3P26998 211 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms