RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 RNASE10Q5GAN6 216 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 FOXI2Q6ZQN5 318 aa10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 SLC24A4Q8NFF2 622 aa10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 LHFPL5Q8TAF8 219 aa10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 YIPF6Q96EC8 236 aa10.34□□□□□ -0.75
SEC61A1-207ENST00000498837 CEBPZOSA8MTT3 80 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 F6UB75 175 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 HPGDSO60760 199 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 HBE1P02100 147 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 ZNF79Q15937 498 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 ETFRF1Q6IPR1 90 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 ARRDC1Q8N5I2 433 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 OR4D10Q8NGI6 311 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 OR13C8Q8NGS7 320 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 ZFAND1Q8TCF1 268 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 MARCH1Q8TCQ1 289 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 GPR146Q96CH1 333 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 C7orf50Q9BRJ6 194 aaKnown RBP10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 PBDC1Q9BVG4 233 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 CACNG5Q9UF02 275 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
SEC61A1-207ENST00000498837 SOCS3O14543 225 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 CDS2O95674 445 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 OR5AC1P0C628 307 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 ID1P41134 155 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 RORCP51449 518 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 PSG9Q00887 426 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 MEF2DQ14814 521 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM78BQ5VT40 261 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM219AQ8IW50 185 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 SELENOHQ8IZQ5 122 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 OR52I2Q8NH67 350 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 TERB2Q8NHR7 220 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 GLYATL2Q8WU03 294 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 TMEM222Q9H0R3 208 aa10.32□□□□□ -0.76
SEC61A1-207ENST00000498837 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 NBDYA0A0U1RRE5 68 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 PRM2P04554 102 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 PSMB3P49720 205 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 SCGB2B2Q4G0G5 96 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 Q8N1X5 172 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 C6orf223Q8N319 242 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
SEC61A1-207ENST00000498837 A0A0J9YX75 114 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 TEX13DA0A0J9YY54 714 aaPredicted RBP10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 B3GALNT1O75752 331 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 PAX9P55771 341 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 RBPMSQ93062 196 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 RTBDNQ9BSG5 229 aaPredicted RBP10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 MTFP1Q9UDX5 166 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 HERC1Q15751 4861 aa10.3□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM25AB3EWG3 89 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM25CB3EWG5 89 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 FAM25GB3EWG6 89 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 NUP62P37198 522 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 NCS1P62166 190 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 ZNF90Q03938 601 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 KLF9Q13886 244 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 SPATA31B1PQ5VZV4 182 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 OR8G2PQ6IF36 304 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 SCRT2Q9NQ03 307 aa10.29□□□□□ -0.76
SEC61A1-207ENST00000498837 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 ISLRO14498 428 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 RAB3DO95716 219 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 TBPP20226 339 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 VBP1P61758 197 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 SUPT4H1P63272 117 aaKnown RBP10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 TMEM268Q5VZI3 342 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 ABHD1Q96SE0 405 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 TMEM208Q9BTX3 173 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 NAA60Q9H7X0 242 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 PFDN2Q9UHV9 154 aa10.28□□□□□ -0.76
SEC61A1-207ENST00000498837 A0A087WXM4 84 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 ZFP92A6NM28 416 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 ZNF705GA8MUZ8 300 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 TNFAIP8O95379 198 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 NUDT3O95989 172 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 LYZP61626 148 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 GAMTQ14353 236 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 FCN2Q15485 313 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 C1orf194Q5T5A4 169 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 FAAP20Q6NZ36 180 aa10.27□□□□□ -0.77
SEC61A1-207ENST00000498837 TMEM229BQ8NBD8 167 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms