RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ID1P41134 155 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 UCP3P55916 312 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 CLINT1Q14677 625 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 FCN2Q15485 313 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 AMTNQ6UX39 209 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 OR51G1Q8NGK1 321 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 GPR146Q96CH1 333 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 A8MTW9 85 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 ATP5G1P05496 136 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 PSG1P11464 419 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 ATP5G3P48201 142 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 TSPAN5P62079 268 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 EBLN2Q6P2I7 272 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 BLOC1S6Q9UL45 172 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 UBR4Q5T4S7 5183 aa10.82□□□□□ -0.68
HDAC6-236ENST00000498808 EBAG9O00559 213 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 ELK1P19419 428 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 HTR2BP41595 481 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 TMEM170AQ8WVE7 144 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
HDAC6-236ENST00000498808 UHRF2Q96PU4 802 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
HDAC6-236ENST00000498808 SRRM2Q9UQ35 2752 aaKnown RBP10.81□□□□□ -0.68
HDAC6-236ENST00000498808 A0A1W2PPQ1 181 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 CRXO43186 299 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-236ENST00000498808 PI3P19957 117 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 AZU1P20160 251 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 RND3P61587 244 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 C2orf83Q53S99 150 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 TMEM69Q5SWH9 247 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 Q6ZRN7 208 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-236ENST00000498808 OR4C16Q8NGL9 310 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
HDAC6-236ENST00000498808 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 ACY3Q96HD9 319 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 ABHD1Q96SE0 405 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 ZNF586Q9NXT0 402 aa10.8□□□□□ -0.68
HDAC6-236ENST00000498808 CBY3A6NI87 242 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 ISLRO14498 428 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 TSPOP30536 169 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 PRSS3P35030 304 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 NUP62P37198 522 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-236ENST00000498808 SPCS3P61009 180 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 AARDQ4LEZ3 155 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 CNBD2Q96M20 576 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 UPK3BQ9BT76 320 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 PGPEP1Q9NXJ5 209 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 DOK5Q9P104 306 aa10.79□□□□□ -0.68
HDAC6-236ENST00000498808 ATG12O94817 140 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 PGAM2P15259 253 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 LINC00315P59091 139 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 UBE2NLQ5JXB2 153 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 OR8G2PQ6IF36 304 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 SPARTQ8N0X7 666 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 SLC24A4Q8NFF2 622 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 GPX8Q8TED1 209 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 HEYLQ9NQ87 328 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-236ENST00000498808 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
HDAC6-236ENST00000498808 LOC100506127A0A0U1RQW1 187 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 M0R2Z0 102 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 INSP01308 110 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 SMR3BP02814 79 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-236ENST00000498808 PIGPP57054 158 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 KRTAP10-1P60331 282 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 GABARAPL2P60520 117 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
HDAC6-236ENST00000498808 SPINK13Q1W4C9 94 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 TRIM16LQ309B1 348 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 SP6Q3SY56 376 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 OR11H7Q8NGC8 314 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 OR52E5Q8NH55 327 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 RRNAD1Q96FB5 475 aaKnown RBP10.77□□□□□ -0.69
HDAC6-236ENST00000498808 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
HDAC6-236ENST00000498808 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
HDAC6-236ENST00000498808 ESRGQ1W209 222 aa10.76□□□□□ -0.69
HDAC6-236ENST00000498808 C1orf194Q5T5A4 169 aa10.76□□□□□ -0.69
HDAC6-236ENST00000498808 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
HDAC6-236ENST00000498808 BAP18Q8IXM2 172 aa10.76□□□□□ -0.69
HDAC6-236ENST00000498808 ZNF486Q96H40 463 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-236ENST00000498808 J3QL48 77 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 TMEM127O75204 238 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 UCP1P25874 307 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 RCVRNP35243 200 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 CNN1P51911 297 aaKnown RBP10.75□□□□□ -0.69
HDAC6-236ENST00000498808 B2MP61769 119 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 CDPF1Q6NVV7 123 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
HDAC6-236ENST00000498808 FCGR1BQ92637 280 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 GNPNAT1Q96EK6 184 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-236ENST00000498808 C17orf77Q96MU5 243 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 PFDN2Q9UHV9 154 aa10.75□□□□□ -0.69
HDAC6-236ENST00000498808 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
HDAC6-236ENST00000498808 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms