RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 RCC1LQ96I51 464 aaKnown RBP12.53□□□□□ -0.4
LMNA-217ENST00000498722 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
LMNA-217ENST00000498722 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
LMNA-217ENST00000498722 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
LMNA-217ENST00000498722 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 GUK1Q16774 197 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 THAP8Q8NA92 274 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 TMEM68Q96MH6 324 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 FNDC4Q9H6D8 234 aaPredicted RBP12.52□□□□□ -0.41
LMNA-217ENST00000498722 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
LMNA-217ENST00000498722 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 CCL24O00175 119 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 OR10J1P30954 320 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
LMNA-217ENST00000498722 MFAP2P55001 183 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 PRR20EP86478 221 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 PRR20CP86479 221 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 PRR20DP86480 221 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 PRR20BP86481 221 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 PRR20AP86496 221 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 MLANAQ16655 118 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 C1QL4Q86Z23 238 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 RPP25LQ8N5L8 163 aaKnown RBP12.51□□□□□ -0.41
LMNA-217ENST00000498722 STPG3Q8N7X2 389 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
LMNA-217ENST00000498722 RAX2Q96IS3 184 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 SLC45A2Q9UMX9 530 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 NOTCH1P46531 2555 aa12.51□□□□□ -0.41
LMNA-217ENST00000498722 SEC14L6B5MCN3 397 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 IFNA1P01562 189 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 CD5P06127 495 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 MYCNOSP40205 109 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 SELENOTP62341 195 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 LCN15Q6UWW0 184 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 CYP2G1PQ6ZSU1 146 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 EIF5A2Q9GZV4 153 aaKnown RBP12.5□□□□□ -0.41
LMNA-217ENST00000498722 THYN1Q9P016 225 aa12.5□□□□□ -0.41
LMNA-217ENST00000498722 CMYA5Q8N3K9 4069 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 A0A1B0GV50 99 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 H3BUA1 57 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 YIF1AO95070 293 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 MT-CO2P00403 227 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 RND2P52198 227 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 RHOBP62745 196 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 DEFA5Q01523 94 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 KIAA0141Q14154 515 aaPredicted RBP12.49□□□□□ -0.41
LMNA-217ENST00000498722 TMEM116Q8NCL8 245 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 OR11H1Q8NG94 326 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 LINC00052Q96N35 136 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 RNF2Q99496 336 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 SLC25A22Q9H936 323 aa12.49□□□□□ -0.41
LMNA-217ENST00000498722 IGKV1OR2-108A0A075B7D4 117 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 RBFOX3A6NFN3 312 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 LINC00869P0C866 280 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
LMNA-217ENST00000498722 TAGLN2P37802 199 aaKnown RBP12.48□□□□□ -0.41
LMNA-217ENST00000498722 PPT1P50897 306 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 LINC00482Q8N8I6 264 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 DPF1Q92782 380 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 RAB24Q969Q5 203 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 TRGV9Q99603 122 aa12.48□□□□□ -0.41
LMNA-217ENST00000498722 A0A0G2JLM5 398 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 G3V4G9 280 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 I3L2K1 104 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 LGALS1P09382 135 aaKnown RBP12.47□□□□□ -0.41
LMNA-217ENST00000498722 IGLL1P15814 213 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 CCL20P78556 96 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
LMNA-217ENST00000498722 OXLD1Q5BKU9 147 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 ZNF506Q5JVG8 444 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 OR1L4Q8NGR5 311 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 OR1N2Q8NGR9 330 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 OR4X1Q8NH49 305 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 TMEM231Q9H6L2 316 aa12.47□□□□□ -0.41
LMNA-217ENST00000498722 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 FABP1P07148 127 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 FGF8P55075 233 aaPredicted RBP12.46□□□□□ -0.41
LMNA-217ENST00000498722 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 C19orf35Q6ZS72 473 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 PFDN5Q99471 154 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 SCRT1Q9BWW7 348 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 SEC11CQ9BY50 192 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
LMNA-217ENST00000498722 DMRT1Q9Y5R6 373 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms