RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PXMP4Q9Y6I8 212 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 RBFOX2O43251 390 aaKnown RBP eCLIP7.19□□□□□ -1.26
FN1-227ENST00000498719 MMP23AO75900 390 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 KLF3P57682 345 aaPredicted RBP7.19□□□□□ -1.26
FN1-227ENST00000498719 ERVK-16P61578 105 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
FN1-227ENST00000498719 FAM78BQ5VT40 261 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 OR2T10Q8NGZ9 312 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 OR1P1Q8NH06 330 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 DDB2Q92466 427 aa7.19□□□□□ -1.26
FN1-227ENST00000498719 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 LHBP01229 141 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 LYG1Q8N1E2 194 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 OR4F17Q8NGA8 305 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 FAM215AQ9Y5M1 114 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 ABCA1O95477 2261 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 APC2O95996 2303 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 FOXH1O75593 365 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 PPBPP02775 128 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 CGB3P0DN86 165 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 CGB7P0DN87 165 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 IL3RAP26951 378 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 OPRK1P41145 380 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 TCF23Q7RTU1 214 aa7.18□□□□□ -1.26
FN1-227ENST00000498719 YTHDF2Q9Y5A9 579 aaKnown RBP7.18□□□□□ -1.26
FN1-227ENST00000498719 PTPRZ1P23471 2315 aaPredicted RBP7.18□□□□□ -1.26
FN1-227ENST00000498719 FAM231BA6NCW3 169 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 C15orf61A6NNL5 157 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 K7EM74 188 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 PDE6DO43924 150 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 GGCTO75223 188 aaKnown RBP7.17□□□□□ -1.26
FN1-227ENST00000498719 VENTXO95231 258 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 GPX4P36969 197 aaPredicted RBP7.17□□□□□ -1.26
FN1-227ENST00000498719 FAM216BQ8N7L0 139 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 CCL13Q99616 98 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 CA2P00918 260 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 IGKV1-16P04430 117 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 GZMBP10144 247 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 GLRXP35754 106 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 THBS3P49746 956 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 OR10J3Q5JRS4 329 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 ZCCHC24Q8N2G6 241 aaKnown RBP7.17□□□□□ -1.26
FN1-227ENST00000498719 OR4S2Q8NH73 311 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 KCNIP2Q9NS61 270 aa7.17□□□□□ -1.26
FN1-227ENST00000498719 SVEP1Q4LDE5 3571 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 MPDU1O75352 247 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 NPY1RP25929 384 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 S100A7P31151 101 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 MRPS11P82912 194 aaKnown RBP7.16□□□□□ -1.26
FN1-227ENST00000498719 DEFA6Q01524 100 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 NPVFQ9HCQ7 196 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 IDI2-AS1Q9NZ38 188 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 TLN1Q9Y490 2541 aaKnown RBP7.16□□□□□ -1.26
FN1-227ENST00000498719 TMEM178BH3BS89 294 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
FN1-227ENST00000498719 SRP14P37108 136 aaKnown RBP7.16□□□□□ -1.26
FN1-227ENST00000498719 SLC35B1P78383 322 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 FAM19A1Q7Z5A9 133 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 ZADH2Q8N4Q0 377 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 SGMS2Q8NHU3 365 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 SFRP2Q96HF1 295 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
FN1-227ENST00000498719 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 IGLV3-9A0A075B6K5 115 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 CXorf1O96002 111 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 IGHV1-46P01743 117 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 NDUFB7P17568 137 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 GCHFRP30047 84 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 HSPE1P61604 102 aaKnown RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 RPL31P62899 125 aaKnown RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 CCL8P80075 99 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 TNFAIP6P98066 277 aaPredicted RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 MLANAQ16655 118 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 COA6Q5JTJ3 125 aaKnown RBP7.15□□□□□ -1.26
FN1-227ENST00000498719 Q75L30 129 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 OR4P4Q8NGL7 312 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 GAFA1Q96PS6 74 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 RNF7Q9UBF6 113 aa7.15□□□□□ -1.26
FN1-227ENST00000498719 IGKV1OR2-108A0A075B7D4 117 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 TRGV10A0A0A0MS01 117 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 TRGV8A0A0C4DH27 118 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 ZNF705GA8MUZ8 300 aaPredicted RBP7.15□□□□□ -1.27
FN1-227ENST00000498719 F6UZH7 168 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 SLC17A3O00476 420 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 NUPR1O60356 82 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 TYMSP04818 313 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 DDTP30046 118 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 RAB7AP51149 207 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 RPL32P62910 135 aaKnown RBP7.15□□□□□ -1.27
FN1-227ENST00000498719 MIR17HGQ75NE6 70 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 C1orf174Q8IYL3 243 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 TMEM256Q8N2U0 113 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 ZNF439Q8NDP4 499 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 C19orf73Q9NVV2 129 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 OR51B2Q9Y5P1 312 aa7.15□□□□□ -1.27
FN1-227ENST00000498719 NBASA2RRP1 2371 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms