RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 FAT1Q14517 4588 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 ZNF705GA8MUZ8 300 aaPredicted RBP8.15□□□□□ -1.1
CDK9-205ENST00000498339 TOMM40O96008 361 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 ATP5G1P05496 136 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 NAT1P18440 290 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 PRSS3P35030 304 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 ATP5G3P48201 142 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 UBE2NLQ5JXB2 153 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 SPARTQ8N0X7 666 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 NPIPB3Q92617 1050 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 PPP1R14BQ96C90 147 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 CLUHP3Q96NS8 147 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 TP53RKQ96S44 253 aa8.15□□□□□ -1.1
CDK9-205ENST00000498339 HEYLQ9NQ87 328 aaPredicted RBP8.15□□□□□ -1.1
CDK9-205ENST00000498339 INSP01308 110 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 PRM2P04554 102 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 PI3P19957 117 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 BTF3P20290 206 aaKnown RBP8.14□□□□□ -1.11
CDK9-205ENST00000498339 FCN2Q15485 313 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 ETFRF1Q6IPR1 90 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 SLC24A4Q8NFF2 622 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 RNASEH2CQ8TDP1 164 aaKnown RBP8.14□□□□□ -1.11
CDK9-205ENST00000498339 FCGR1BQ92637 280 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 GPR146Q96CH1 333 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 UHRF2Q96PU4 802 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 ABHD1Q96SE0 405 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 DOK5Q9P104 306 aa8.14□□□□□ -1.11
CDK9-205ENST00000498339 A0A0J9YX75 114 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 PSG1P11464 419 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 RCVRNP35243 200 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDK9-205ENST00000498339 PAX9P55771 341 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 UCP3P55916 312 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 PIGPP57054 158 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 GABARAPL2P60520 117 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 SPCS3P61009 180 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 BSXQ3C1V8 233 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 LYSMD2Q8IV50 215 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 SAMD12Q8N8I0 201 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 NRG4Q8WWG1 115 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 C16orf92Q96LL3 132 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 Q9H3A6 140 aa8.13□□□□□ -1.11
CDK9-205ENST00000498339 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 C3orf85A0A1B0GTC6 90 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 M0R2Z0 102 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 ISLRO14498 428 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 EREGO14944 169 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 NXPH3O95157 252 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 P0C879 139 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 LYZP61626 148 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 SUPT4H1P63272 117 aaKnown RBP8.12□□□□□ -1.11
CDK9-205ENST00000498339 SPINK13Q1W4C9 94 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 SP6Q3SY56 376 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 ZNF586Q9NXT0 402 aa8.12□□□□□ -1.11
CDK9-205ENST00000498339 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 J3QL48 77 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 SOCS3O14543 225 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 HTN1P15515 57 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 RND3P61587 244 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 OR5I1Q13606 314 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 OR8G2PQ6IF36 304 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 IZUMO2Q6UXV1 221 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 BAP18Q8IXM2 172 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 OR8I2Q8N0Y5 310 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 GNPNAT1Q96EK6 184 aaPredicted RBP8.11□□□□□ -1.11
CDK9-205ENST00000498339 ZNF486Q96H40 463 aaPredicted RBP8.11□□□□□ -1.11
CDK9-205ENST00000498339 VCX3BQ9H321 246 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 COPZ2Q9P299 210 aa8.11□□□□□ -1.11
CDK9-205ENST00000498339 CBY3A6NI87 242 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 B2MP61769 119 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 SNX29P2Q8IUI4 249 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 CROCCP3Q8IVE0 287 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 CCDC71LQ8N9Z2 235 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 C20orf173Q96LM9 149 aa8.1□□□□□ -1.11
CDK9-205ENST00000498339 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
CDK9-205ENST00000498339 TRAV12-2A0A075B6T6 113 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 TRAV26-1A0A087WT03 109 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 A0A0J9YY99 117 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 TMEM127O75204 238 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 IFNA5P01569 189 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
CDK9-205ENST00000498339 AZU1P20160 251 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 TSPOP30536 169 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 MEOX2P50222 304 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 CNN1P51911 297 aaKnown RBP8.09□□□□□ -1.11
CDK9-205ENST00000498339 LINC00315P59091 139 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 ERVFC1-1P60608 527 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 RNASE12Q5GAN4 147 aaKnown RBP8.09□□□□□ -1.11
CDK9-205ENST00000498339 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
CDK9-205ENST00000498339 NOXA1Q86UR1 476 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms