RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 PRSS54Q6PEW0 395 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 ADAMTSL5Q6ZMM2 481 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 Q6ZNX1 250 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 ACY3Q96HD9 319 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 WWC2-AS2Q96NR7 200 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 ASCL2Q99929 193 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 SPATA25Q9BR10 227 aa7.83□□□□□ -1.16
PTPRN-218ENST00000497977 NOTCH1P46531 2555 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 LOC102724200A0A096LPH7 203 aaPredicted RBP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 TRAV2A0A0B4J234 112 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 IGSF23A1L1A6 192 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 IZUMO1RA6ND01 250 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 FAM24AA6NFZ4 105 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 SMLR1H3BR10 107 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 TSC22D2O75157 780 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 DFFBO76075 338 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 RLN2P04090 185 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 HNRNPCP07910 306 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 GIPP09681 153 aaPredicted RBP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 APOC4P55056 127 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 AKR1C1Q04828 323 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 ACOT7LQ6ZUV0 252 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 OR10P1Q8NGE3 313 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 OR51G1Q8NGK1 321 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 SMIM8Q96KF7 97 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 FNDC4Q9H6D8 234 aaPredicted RBP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 MRPL36Q9P0J6 103 aaKnown RBP7.82□□□□□ -1.16
PTPRN-218ENST00000497977 RABAC1Q9UI14 185 aa7.82□□□□□ -1.16
PTPRN-218ENST00000497977 FXYD6-FXYD2A0A087WZ82 144 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 UBE2CO00762 179 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 CST7O76096 145 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 MPC2O95563 127 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 TOMM40O96008 361 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 CRYBB3P26998 211 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 PAX9P55771 341 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 IL15RAQ13261 267 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 SAMD13Q5VXD3 122 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 TCF24Q7RTU0 167 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 STX12Q86Y82 276 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 SBSPONQ8IVN8 264 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 LILRB2Q8N423 598 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 TMEM217Q8N7C4 229 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 STPG3Q8N7X2 389 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 OR2T35Q8NGX2 323 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 THAP6Q8TBB0 222 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 CHAC2Q8WUX2 184 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 VSIRQ9H7M9 311 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 SRD5A3Q9H8P0 318 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 LYRM2Q9NU23 88 aaPredicted RBP7.81□□□□□ -1.16
PTPRN-218ENST00000497977 FBXL17Q9UF56 701 aa7.81□□□□□ -1.16
PTPRN-218ENST00000497977 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 E5RGE8 158 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 H0YIZ8 118 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 IL4P05112 153 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 CD7P09564 240 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 IGLC1P0CG04 106 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 RAP2BP61225 183 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 SLC38A11Q08AI6 406 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 RAB31Q13636 194 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 GAMTQ14353 236 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 TIGITQ495A1 244 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 PPP1R14BQ96C90 147 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 RNF2Q99496 336 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 GGACTQ9BVM4 153 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 GGTLC1Q9BX51 225 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 C11orf1Q9H5F2 150 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 NPVFQ9HCQ7 196 aa7.8□□□□□ -1.16
PTPRN-218ENST00000497977 IGHV3OR16-8A0A075B7F1 116 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 UBE2L5PA0A1B0GUS4 154 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 SNRPD3P62318 126 aaKnown RBP7.79□□□□□ -1.16
PTPRN-218ENST00000497977 SELENOTP62341 195 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 EWSR1Q01844 656 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPRN-218ENST00000497977 CLINT1Q14677 625 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 HAGHQ16775 308 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 Q5BKY6 102 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 C1orf194Q5T5A4 169 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 TMEM14EPQ6UXP3 125 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 AKAP14Q86UN6 197 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 BPIFCQ8NFQ6 507 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 RCHY1Q96PM5 261 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 TRGV9Q99603 122 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
PTPRN-218ENST00000497977 SEPSECSQ9HD40 501 aaKnown RBP7.79□□□□□ -1.16
PTPRN-218ENST00000497977 KIR2DL5BA0A0G2JN68 375 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 KIR2DL5BA0A0G2JPC4 375 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 FNDC10F2Z333 226 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 PSG1P11464 419 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 ID1P41134 155 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 P2RY1P47900 373 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 TFPI2P48307 235 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 SULT1A1P50225 295 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 FGL1Q08830 312 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 ARL16Q0P5N6 197 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 TMEM144Q7Z5S9 345 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 WFDC3Q8IUB2 231 aa7.78□□□□□ -1.16
PTPRN-218ENST00000497977 KIR2DL5AQ8N109 375 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms