RNA–Protein interactions for RNA: ENST00000497908.1

UBA7-211, Transcript of ubiquitin like modifier activating enzyme 7, human

TSL 2

Gene UBA7, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA7-211	ENST00000497908	ATF4	P18848	351 aa	Predicted RBP	10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	SNRPD3	P62318	126 aa	Known RBP	10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	GAMT	Q14353	236 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	ACTL10	Q5JWF8	245 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	SIGLEC15	Q6ZMC9	328 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	RNF125	Q96EQ8	232 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	CIB3	Q96Q77	187 aa	Predicted RBP	10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	SRR	Q9GZT4	340 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	RBM38	Q9H0Z9	239 aa	Known RBP	10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	AGRN	O00468	2067 aa		10.17	□□□□□ -0.78
UBA7-211	ENST00000497908	CENPX	A8MT69	81 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	SNRPGP15	A8MWD9	76 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	WRB	O00258	174 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	BUB3	O43684	328 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	SYNGR2	O43760	224 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	NUP62	P37198	522 aa	Predicted RBP	10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	PSMG4	Q5JS54	123 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	MORN3	Q6PF18	240 aa	Predicted RBP	10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	GLMP	Q8WWB7	406 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	PPP1R14B	Q96C90	147 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	MAGT1	Q9H0U3	335 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	DNAH7	Q8WXX0	4024 aa		10.16	□□□□□ -0.78
UBA7-211	ENST00000497908	LY6G6C	O95867	125 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	SPP1	P10451	314 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	UBE2M	P61081	183 aa	Known RBP	10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	LYZ	P61626	148 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	ZNF90	Q03938	601 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	OR2F1	Q13607	317 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	BAK1	Q16611	211 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	TMEM41B	Q5BJD5	291 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	GGNBP1	Q5YKI7	109 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	TRPT1	Q86TN4	253 aa	Known RBP	10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	C11orf45	Q8TAV5	145 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	RAB40C	Q96S21	281 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	NRN1	Q9NPD7	142 aa		10.15	□□□□□ -0.78
UBA7-211	ENST00000497908	C9orf170	A2RU37	121 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	DEFB4A	O15263	64 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	IFNA21	P01568	189 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	NUTF2	P61970	127 aa	Known RBP	10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	SPANXN5	Q5MJ07	72 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	OR8G2P	Q6IF36	304 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	COQ8A	Q8NI60	647 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	MFF	Q9GZY8	342 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	FBXL17	Q9UF56	701 aa		10.14	□□□□□ -0.79
UBA7-211	ENST00000497908	NDUFB6	O95139	128 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	ID1	P41134	155 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	C4orf46	Q504U0	113 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	TRGV9	Q99603	122 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	SEPSECS	Q9HD40	501 aa	Known RBP	10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	FLVCR2	Q9UPI3	526 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	STRAP	Q9Y3F4	350 aa	Known RBP	10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	RYR3	Q15413	4870 aa		10.13	□□□□□ -0.79
UBA7-211	ENST00000497908	IGKV1D-37	A0A075B6S9	117 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	ADAP1	O75689	374 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	CFD	P00746	253 aa	Predicted RBP	10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	NANOS2	P60321	138 aa	Known RBP	10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	OR8I2	Q8N0Y5	310 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	LINC00476	Q8WZB0	136 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	LINC00052	Q96N35	136 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	C11orf68	Q9H3H3	251 aa	Known RBP	10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	CLEC5A	Q9NY25	188 aa		10.12	□□□□□ -0.79
UBA7-211	ENST00000497908	CSMD3	Q7Z407	3707 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	OR4E1	P0C645	316 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	NKX2-1	P43699	371 aa	Predicted RBP	10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	AKR1C1	Q04828	323 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	C1orf194	Q5T5A4	169 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	C7orf50	Q9BRJ6	194 aa	Known RBP	10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	C1QTNF4	Q9BXJ3	329 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	PSENEN	Q9NZ42	101 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	NDUFA13	Q9P0J0	144 aa		10.11	□□□□□ -0.79
UBA7-211	ENST00000497908	SMCO3	A2RU48	225 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908		H3BP45	60 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	GIG44	P09565	113 aa	Predicted RBP	10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	MIF	P14174	115 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	S100A7	P31151	101 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	POLR2G	P62487	172 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	ID3	Q02535	119 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	THAP8	Q8NA92	274 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	BPIFC	Q8NFQ6	507 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	TBC1D24	Q9ULP9	559 aa		10.1	□□□□□ -0.79
UBA7-211	ENST00000497908	SCGB1D2	O95969	90 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	IL7	P13232	177 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	ORM2	P19652	201 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	ANXA7	P20073	488 aa	Known RBP	10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	C4BPB	P20851	252 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	CNPY1	Q3B7I2	92 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	SDHC	Q99643	169 aa	Predicted RBP	10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	SLC25A22	Q9H936	323 aa		10.09	□□□□□ -0.79
UBA7-211	ENST00000497908	IGKV1OR2-108	A0A075B7D4	117 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	IGHV4-28	A0A0C4DH34	117 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908		H3BMM0	161 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	SSSCA1	O60232	199 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	GALR1	P47211	349 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	OR1B1	Q8NGR6	318 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	C2CD4C	Q8TF44	421 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	WDR12	Q9GZL7	423 aa	Known RBP	10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	GSKIP	Q9P0R6	139 aa		10.08	□□□□□ -0.8
UBA7-211	ENST00000497908	XCL2	Q9UBD3	114 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms