RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 A8MWP6 167 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 CSN3P07498 182 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 FOLR2P14207 255 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 FGF7P21781 194 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 LYZP61626 148 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 C9orf66Q5T8R8 295 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 BTNL8Q6UX41 500 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 TMEM182Q6ZP80 229 aaPredicted RBP9.05□□□□□ -0.96
CUX1-210ENST00000497815 OR11H4Q8NGC9 324 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 OR51G1Q8NGK1 321 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 AQP10Q96PS8 301 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 MGST2Q99735 147 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 ATP5SQ99766 215 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 GINS3Q9BRX5 216 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
CUX1-210ENST00000497815 FBXL17Q9UF56 701 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 WDR83OSQ9Y284 106 aa9.05□□□□□ -0.96
CUX1-210ENST00000497815 IGHV3-66A0A0C4DH42 116 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 RNF222A6NCQ9 220 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 G3V4G9 280 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 AGPAT2O15120 278 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 CBLN1P23435 193 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 CAMLGP49069 296 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 CD300CQ08708 224 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
CUX1-210ENST00000497815 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 TCTE3Q8IZS6 198 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 BPIFCQ8NFQ6 507 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 DYNLRB2Q8TF09 96 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 DOK5Q9P104 306 aa9.04□□□□□ -0.96
CUX1-210ENST00000497815 LSM4Q9Y4Z0 139 aaKnown RBP9.04□□□□□ -0.96
CUX1-210ENST00000497815 VWFP04275 2813 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 IGHV7-4-1A0A0J9YVY3 117 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 WI2-2373I1.2A0A1W2PRP0 233 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 K7EMT4 169 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 DFFBO76075 338 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 IFNA5P01569 189 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
CUX1-210ENST00000497815 ORM2P19652 201 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 ELLP55199 621 aaPredicted RBP9.03□□□□□ -0.96
CUX1-210ENST00000497815 RAB31Q13636 194 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 METTL26Q96S19 204 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 MFFQ9GZY8 342 aa9.03□□□□□ -0.96
CUX1-210ENST00000497815 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
CUX1-210ENST00000497815 LINC00869P0C866 280 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 NPPCP23582 126 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 SELENOTP62341 195 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 MIC13Q5XKP0 118 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 SCGB1C1Q8TD33 95 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 NPCDR1Q9BY65 106 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 WDR61Q9GZS3 305 aaKnown RBP9.02□□□□□ -0.97
CUX1-210ENST00000497815 MLXQ9UH92 298 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 SMPXQ9UHP9 88 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 WNK1Q9H4A3 2382 aa9.02□□□□□ -0.97
CUX1-210ENST00000497815 CFDP00746 253 aaPredicted RBP9.01□□□□□ -0.97
CUX1-210ENST00000497815 HNRNPCP07910 306 aaKnown RBP eCLIP9.01□□□□□ -0.977e-7■■□□□ 13.7
CUX1-210ENST00000497815 C8orf88P0DMB2 117 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 EIF2B2P49770 351 aaKnown RBP9.01□□□□□ -0.97
CUX1-210ENST00000497815 INSL3P51460 131 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 SAMD5Q5TGI4 173 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 STPG3Q8N7X2 389 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 ZNF709Q8N972 641 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 ST8SIA2Q92186 375 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 MARC2Q969Z3 335 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 PPP1R14BQ96C90 147 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 NARS2Q96I59 477 aaKnown RBP9.01□□□□□ -0.97
CUX1-210ENST00000497815 RSG1Q9BU20 258 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 GPR61Q9BZJ8 451 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 ARL6Q9H0F7 186 aa9.01□□□□□ -0.97
CUX1-210ENST00000497815 HMSDA8MTL9 139 aa9□□□□□ -0.97
CUX1-210ENST00000497815 CHEK1O14757 476 aa9□□□□□ -0.97
CUX1-210ENST00000497815 MPDU1O75352 247 aa9□□□□□ -0.97
CUX1-210ENST00000497815 IGLV1-51P01701 117 aa9□□□□□ -0.97
CUX1-210ENST00000497815 C1QBP02746 253 aa9□□□□□ -0.97
CUX1-210ENST00000497815 OR5G3P0C626 314 aa9□□□□□ -0.97
CUX1-210ENST00000497815 CXCL2P19875 107 aa9□□□□□ -0.97
CUX1-210ENST00000497815 CRYBB3P26998 211 aa9□□□□□ -0.97
CUX1-210ENST00000497815 OPCMLQ14982 345 aa9□□□□□ -0.97
CUX1-210ENST00000497815 DEFB114Q30KQ6 69 aa9□□□□□ -0.97
CUX1-210ENST00000497815 CD300EQ496F6 205 aaPredicted RBP9□□□□□ -0.97
CUX1-210ENST00000497815 RNF2Q99496 336 aa9□□□□□ -0.97
CUX1-210ENST00000497815 NEURL2Q9BR09 285 aa9□□□□□ -0.97
CUX1-210ENST00000497815 SLC39A9Q9NUM3 307 aa9□□□□□ -0.97
CUX1-210ENST00000497815 SIGLEC8Q9NYZ4 499 aa9□□□□□ -0.97
CUX1-210ENST00000497815 PXMP4Q9Y6I8 212 aa9□□□□□ -0.97
CUX1-210ENST00000497815 TRRAPQ9Y4A5 3859 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 IGKV3-7A0A075B6H7 116 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 IZUMO1RA6ND01 250 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 C17orf112F2Z3M2 114 aa8.99□□□□□ -0.97
CUX1-210ENST00000497815 COX7A2P2O60397 106 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms