RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TNFSF18Q9UNG2 199 aa15.26■□□□□ 0.03
CTSD-206ENST00000497544 NOTCH3Q9UM47 2321 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 UBE2L5PA0A1B0GUS4 154 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 K7EMT4 169 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 ZNF207O43670 478 aaKnown RBP15.25■□□□□ 0.03
CTSD-206ENST00000497544 SAP30O75446 220 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 DFFBO76075 338 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 IGLL1P15814 213 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 C9orf66Q5T8R8 295 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 CYP2G1PQ6ZSU1 146 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 TCTE3Q8IZS6 198 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 OR51G1Q8NGK1 321 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 ZNF414Q96IQ9 312 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 WDR83OSQ9Y284 106 aa15.25■□□□□ 0.03
CTSD-206ENST00000497544 C2orf70A6NJV1 201 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 A8MWP6 167 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 ARPC5O15511 151 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 CFDP00746 253 aaPredicted RBP15.24■□□□□ 0.03
CTSD-206ENST00000497544 AP2S1P53680 142 aaPredicted RBP15.24■□□□□ 0.03
CTSD-206ENST00000497544 BTNL8Q6UX41 500 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 BPIFCQ8NFQ6 507 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 ATP5SQ99766 215 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 GPR61Q9BZJ8 451 aa15.24■□□□□ 0.03
CTSD-206ENST00000497544 DAZ1Q9NQZ3 744 aaKnown RBP15.24■□□□□ 0.03
CTSD-206ENST00000497544 LSM4Q9Y4Z0 139 aaKnown RBP15.24■□□□□ 0.03
CTSD-206ENST00000497544 AGPAT2O15120 278 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 IFNA5P01569 189 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 IL4P05112 153 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 CSN3P07498 182 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 FGF7P21781 194 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 NPPCP23582 126 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 SELENOTP62341 195 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 IL34Q6ZMJ4 242 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 MFFQ9GZY8 342 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 ZFAND3Q9H8U3 227 aa15.23■□□□□ 0.03
CTSD-206ENST00000497544 MRPL27Q9P0M9 148 aaKnown RBP15.23■□□□□ 0.03
CTSD-206ENST00000497544 TMEM213A2RRL7 107 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 HMSDA8MTL9 139 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 MPDU1O75352 247 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 FOLR2P14207 255 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 CBLN1P23435 193 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 GATA2P23769 480 aaPredicted RBP15.22■□□□□ 0.03
CTSD-206ENST00000497544 CAMLGP49069 296 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 INSL3P51460 131 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 OR11H4Q8NGC9 324 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 SCGB1C1Q8TD33 95 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 MARC2Q969Z3 335 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 METTL26Q96S19 204 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 MGST2Q99735 147 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 PBDC1Q9BVG4 233 aa15.22■□□□□ 0.03
CTSD-206ENST00000497544 WI2-2373I1.2A0A1W2PRP0 233 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 RNF222A6NCQ9 220 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 LYZP61626 148 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 DYNLRB2Q8TF09 96 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 RNF125Q96EQ8 232 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 NARS2Q96I59 477 aaKnown RBP15.21■□□□□ 0.03
CTSD-206ENST00000497544 WFDC1Q9HC57 220 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 SIGLEC8Q9NYZ4 499 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 FBXL17Q9UF56 701 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 SLC45A2Q9UMX9 530 aa15.21■□□□□ 0.03
CTSD-206ENST00000497544 COL7A1Q02388 2944 aa15.2■□□□□ 0.02
CTSD-206ENST00000497544 PRB2P02812 416 aaPredicted RBP15.2■□□□□ 0.02
CTSD-206ENST00000497544 OXLD1Q5BKU9 147 aa15.2■□□□□ 0.02
CTSD-206ENST00000497544 TMEM182Q6ZP80 229 aaPredicted RBP15.2■□□□□ 0.02
CTSD-206ENST00000497544 ZNF709Q8N972 641 aa15.2■□□□□ 0.02
CTSD-206ENST00000497544 WDR61Q9GZS3 305 aaKnown RBP15.2■□□□□ 0.02
CTSD-206ENST00000497544 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
CTSD-206ENST00000497544 IGHV7-4-1A0A0J9YVY3 117 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 C8orf88P0DMB2 117 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 EDN2P20800 178 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 BMI1P35226 326 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 ZNF266Q14584 549 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 SMPXQ9UHP9 88 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 PFDN2Q9UHV9 154 aa15.19■□□□□ 0.02
CTSD-206ENST00000497544 IGHV3-49A0A0A0MS15 119 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 A0A1W2PS18 150 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 C1QBP02746 253 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 HNRNPCP07910 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTSD-206ENST00000497544 LINC00869P0C866 280 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 ORM2P19652 201 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 CRYBB3P26998 211 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 USF2Q15853 346 aaPredicted RBP15.18■□□□□ 0.02
CTSD-206ENST00000497544 BEAN1Q3B7T3 259 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 ADAMTSL5Q6ZMM2 481 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 Q6ZRG5 221 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 OR1B1Q8NGR6 318 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 RHPN1-AS1Q9BWJ2 59 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 GGTLC1Q9BX51 225 aa15.18■□□□□ 0.02
CTSD-206ENST00000497544 TECRQ9NZ01 308 aaKnown RBP15.18■□□□□ 0.02
CTSD-206ENST00000497544 IGHV3OR16-13A0A075B7E8 117 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 BORCS7-ASMTA0A0B4J1R7 106 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 IGHV3-74A0A0B4J1X5 117 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 A0A0D9SG52 128 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 C17orf112F2Z3M2 114 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 TAAR5O14804 337 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 S100A7P31151 101 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 RPL29P47914 159 aaKnown RBP15.17■□□□□ 0.02
CTSD-206ENST00000497544 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
CTSD-206ENST00000497544 OPCMLQ14982 345 aa15.17■□□□□ 0.02
CTSD-206ENST00000497544 MIC13Q5XKP0 118 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms