RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
SHROOM3-210ENST00000497440 APRG1Q8IVJ8 170 aa8.01□□□□□ -1.13
SHROOM3-210ENST00000497440 CIB3Q96Q77 187 aaPredicted RBP8.01□□□□□ -1.13
SHROOM3-210ENST00000497440 CCDC32Q9BV29 185 aa8.01□□□□□ -1.13
SHROOM3-210ENST00000497440 CENPXA8MT69 81 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 HNRNPCP07910 306 aaKnown RBP eCLIP8□□□□□ -1.13
SHROOM3-210ENST00000497440 GIG44P09565 113 aaPredicted RBP8□□□□□ -1.13
SHROOM3-210ENST00000497440 ANXA7P20073 488 aaKnown RBP8□□□□□ -1.13
SHROOM3-210ENST00000497440 AP2S1P53680 142 aaPredicted RBP8□□□□□ -1.13
SHROOM3-210ENST00000497440 ZNF124Q15973 351 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 OR8G2PQ6IF36 304 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 OR51G1Q8NGK1 321 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 TRGV9Q99603 122 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 CSTL1Q9H114 145 aa8□□□□□ -1.13
SHROOM3-210ENST00000497440 IGHV3-66A0A0C4DH42 116 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 HELTA6NFD8 242 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 LYRM1O43325 122 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 SPRY2O43597 315 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 TCRBP04435 133 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 IFNA4P05014 189 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 IL4P05112 153 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 RAB11AP62491 216 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 ZNF90Q03938 601 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 IL15RAQ13261 267 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 TMEM14EPQ6UXP3 125 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 GBGT1Q8N5D6 347 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 COQ8AQ8NI60 647 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 ACY3Q96HD9 319 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 C17orf77Q96MU5 243 aa7.99□□□□□ -1.13
SHROOM3-210ENST00000497440 FNDC10F2Z333 226 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 CFDP00746 253 aaPredicted RBP7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 IAPPP10997 89 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 EIF2B2P49770 351 aaKnown RBP7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 TAS2R30P59541 319 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 DEFB131AP59861 70 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 C1orf194Q5T5A4 169 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 TRPT1Q86TN4 253 aaKnown RBP7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 GATAD1Q8WUU5 269 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 RNF125Q96EQ8 232 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 MAGT1Q9H0U3 335 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 C11orf1Q9H5F2 150 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 SLC45A2Q9UMX9 530 aa7.98□□□□□ -1.13
SHROOM3-210ENST00000497440 SNRPGP15A8MWD9 76 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 K7EPK0 472 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 WRBO00258 174 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 SOCS3O14543 225 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 TFPI2P48307 235 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 INPP1P49441 399 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 RPP30P78346 268 aaKnown RBP7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 EWSR1Q01844 656 aaKnown RBP eCLIP7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 TMEM182Q6ZP80 229 aaPredicted RBP7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 TMEM144Q7Z5S9 345 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 CSNK1G2-AS1Q8NCQ2 148 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 SLC35E1Q96K37 410 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 C20orf85Q9H1P6 137 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 NRN1Q9NPD7 142 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 TBC1D24Q9ULP9 559 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
SHROOM3-210ENST00000497440 DNAH2Q9P225 4427 aa7.96□□□□□ -1.13
SHROOM3-210ENST00000497440 IGKV3-7A0A075B6H7 116 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 LCE6AA0A183 80 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 LINC00854A0A1B0GVQ3 168 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 DNASE2O00115 360 aaPredicted RBP7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 PLP1P60201 277 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 DEFB135Q30KP9 77 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 ZBTB8BQ8NAP8 495 aaPredicted RBP7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 S100ZQ8WXG8 99 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 NARS2Q96I59 477 aaKnown RBP7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 CLUHP3Q96NS8 147 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 RAB40CQ96S21 281 aa7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
SHROOM3-210ENST00000497440 C7orf66A4D0T2 115 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 ZFP92A6NM28 416 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 ZNF705EA8MWA4 302 aaPredicted RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 TSC22D2O75157 780 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 IFNA21P01568 189 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 MBPP02686 304 aaPredicted RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 RPL35AP18077 110 aaKnown RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 NUP62P37198 522 aaPredicted RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 IFITM3Q01628 133 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 ASAH1Q13510 395 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 C4orf46Q504U0 113 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 SPANXN5Q5MJ07 72 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 SIGLEC15Q6ZMC9 328 aa7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 ZNF431Q8TF32 576 aaPredicted RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 RCL1Q9Y2P8 373 aaKnown RBP7.95□□□□□ -1.14
SHROOM3-210ENST00000497440 A0A0J9YWU9 116 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 IL5P05113 134 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 FABP1P07148 127 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 DLK1P80370 383 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 ARL16Q0P5N6 197 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 IAH1Q2TAA2 248 aaPredicted RBP7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 TMEM41BQ5BJD5 291 aa7.94□□□□□ -1.14
SHROOM3-210ENST00000497440 LEMD1Q68G75 181 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms