RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 CORTO00230 105 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 P2RY10O00398 339 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 RBFOX2O43251 390 aaKnown RBP eCLIP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ADAM20O43506 726 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 RHBDL1O75783 438 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 MT-ND6P03923 174 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TFF1P04155 84 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF728P0DKX0 622 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SMIM17P0DL12 118 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 MC5RP33032 325 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF93P35789 620 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 COMPP49747 757 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 GPM6AP51674 278 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 DYNLT3P51808 116 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 PIGPP57054 158 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SERF2P84101 59 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 PAX8Q06710 450 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM187Q14656 261 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 FAM78BQ5VT40 261 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ASPHD2Q6ICH7 369 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ZDHHC23Q8IYP9 409 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 BATF2Q8N1L9 274 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 FAM216BQ8N7L0 139 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SCCPDHQ8NBX0 429 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR8B3Q8NGG8 313 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR5A2Q8NGI9 324 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR5D14Q8NGL3 314 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR5C1Q8NGR4 320 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 MBD3L1Q8WWY6 194 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 KCNS1Q96KK3 526 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR8B2Q96RD0 313 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ATP6V0BQ99437 205 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 BANF2Q9H503 90 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF286AQ9HBT8 521 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 NECAP2Q9NVZ3 263 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 KAAG1Q9UBP8 84 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 DSCAML1Q8TD84 2053 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 IGKV1-27A0A075B6S5 117 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SAA2-SAA4A0A096LPE2 208 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TRAV38-1A0A0B4J264 116 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 KIR2DS1A0A191URI9 304 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 FAM24AA6NFZ4 105 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 J3QR89 54 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SYNGR1O43759 233 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SSSCA1O60232 199 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ZNF737O75373 536 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SERF1AO75920 110 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 S1PR2O95136 353 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 REG1AP05451 166 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR10J4P0C629 311 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 IGHV4-38-2P0DP08 117 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 GZMHP20718 246 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 NPBWR2P48146 333 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 AMTP48728 403 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 YPEL3P61236 119 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 RHOBP62745 196 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 GNG3P63215 75 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 HBG1P69891 147 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 HBG2P69892 147 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 QRFPP83859 136 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 MZT1Q08AG7 82 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 Q0VG73 95 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 CEACAM21Q3KPI0 293 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR10J3Q5JRS4 329 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 PLCXD3Q63HM9 321 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 MRPL54Q6P161 138 aaKnown RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 GLIPR1L1Q6UWM5 242 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 C12orf54Q6X4T0 127 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM144Q7Z5S9 345 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 CALHM1Q8IU99 346 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM256Q8N2U0 113 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM252Q8N6L7 170 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR10P1Q8NGE3 313 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 RTN4IP1Q8WWV3 396 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ADAT3Q96EY9 351 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 GPER1Q99527 375 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ST6GALNAC5Q9BVH7 336 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 ESM1Q9NQ30 184 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 OR51B2Q9Y5P1 312 aa3.95□□□□□ -1.78
CSMD3-208ENST00000497026 SOX21Q9Y651 276 aaPredicted RBP3.95□□□□□ -1.78
CSMD3-208ENST00000497026 IGKV1D-17A0A075B6S4 117 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 TRAV40A0A0B4J280 105 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 IGKV1-9A0A0C4DH69 117 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 J3QT63 122 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 SDCBPO00560 298 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-208ENST00000497026 PDE6DO43924 150 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 PPIAL4GP0DN37 164 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 UCP1P25874 307 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 HILS1P60008 231 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 FGF12P61328 243 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 RUNX1Q01196 453 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 TMEM267Q0VDI3 215 aaPredicted RBP3.94□□□□□ -1.78
CSMD3-208ENST00000497026 HLA-DRB5Q30154 266 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 TCTEX1D4Q5JR98 221 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 FFAR4Q5NUL3 377 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 FAM162BQ5T6X4 162 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
CSMD3-208ENST00000497026 LCN15Q6UWW0 184 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms