RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	RPLP1	P05386	114 aa	Known RBP	7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	PLP1	P60201	277 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	RAB2A	P61019	212 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	DEFA5	Q01523	94 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	ZNF600	Q6ZNG1	722 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	FAM213B	Q8TBF2	198 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	DNAJC4	Q9NNZ3	241 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	PEF1	Q9UBV8	284 aa	Known RBP	7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	RNF24	Q9Y225	148 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	RNF114	Q9Y508	228 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	RFNG	Q9Y644	331 aa		7.15	□□□□□ -1.26
PCDH15-223	ENST00000495484	COX7A2P2	O60397	106 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	GGCT	O75223	188 aa	Known RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	HYPM	O75409	117 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	YIF1A	O95070	293 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	GATA2	P23769	480 aa	Predicted RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	ADM	P35318	185 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	ARL3	P36405	182 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	CDX1	P47902	265 aa	Predicted RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	RHOB	P62745	196 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	KIAA0141	Q14154	515 aa	Predicted RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	C10orf99	Q6UWK7	81 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	RPP25L	Q8N5L8	163 aa	Known RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	WIPF2	Q8TF74	440 aa	Predicted RBP	7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	GNB4	Q9HAV0	340 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	PLA2G2E	Q9NZK7	142 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	PFDN2	Q9UHV9	154 aa		7.15	□□□□□ -1.27
PCDH15-223	ENST00000495484	CTXND1	A0A1B0GTU2	59 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	SEC14L6	B5MCN3	397 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	IGHV3-11	P01762	117 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	HBE1	P02100	147 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	NMB	P08949	121 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	LGALS1	P09382	135 aa	Known RBP	7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	H2AFB1	P0C5Y9	115 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	ORM2	P19652	201 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	FOXL1	Q12952	345 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	C10orf113	Q5VZT2	155 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	LCNL1	Q6ZST4	164 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	RNF125	Q96EQ8	232 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	CHRDL1	Q9BU40	450 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	MRPL32	Q9BYC8	188 aa	Known RBP	7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	VSIR	Q9H7M9	311 aa		7.14	□□□□□ -1.27
PCDH15-223	ENST00000495484	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	BMPR1B	O00238	502 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	IL4	P05112	153 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	OR5G3	P0C626	314 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	CDC34	P49427	236 aa	Predicted RBP	7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	TAS2R45	P59539	299 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	LYZ	P61626	148 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	FAM106A	Q4KMX7	169 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	GCSAML	Q5JQS6	135 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	FAM78B	Q5VT40	261 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	OR1B1	Q8NGR6	318 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	C4orf3	Q8WVX3	66 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	MBD3L1	Q8WWY6	194 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	RAB24	Q969Q5	203 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	RCC1L	Q96I51	464 aa	Known RBP	7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	FUT9	Q9Y231	359 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	HIGD1A	Q9Y241	93 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	PUS1	Q9Y606	427 aa	Known RBP eCLIP	7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	TRAV1-1	A0A0B4J248	108 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	ANKRD34B	A5PLL1	514 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	NUDT19	A8MXV4	375 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	NDUFA4	O00483	81 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	FHIT	P49789	147 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	PROK1	P58294	105 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	NDUFA5	Q16718	116 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	FAM122C	Q6P4D5	195 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	SFT2D1	Q8WV19	159 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	TMEM37	Q8WXS4	190 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	PBDC1	Q9BVG4	233 aa		7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	MRPL27	Q9P0M9	148 aa	Known RBP	7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	TSSC4	Q9Y5U2	329 aa	Predicted RBP	7.13	□□□□□ -1.27
PCDH15-223	ENST00000495484	PPP5D1	E7EU14	171 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	HSPB1	P04792	205 aa	Known RBP	7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	TCTEX1D4	Q5JR98	221 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	KHDC1L	Q5JSQ8	128 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	TOMM20L	Q6UXN7	152 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	LINC00305	Q7Z4B0	112 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	GPHB5	Q86YW7	130 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	STXBP6	Q8NFX7	210 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	LYPD6B	Q8NI32	183 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	HRH4	Q9H3N8	390 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	SEPSECS	Q9HD40	501 aa	Known RBP	7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	TECR	Q9NZ01	308 aa	Known RBP	7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	DOK5	Q9P104	306 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	RABAC1	Q9UI14	185 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	MAST4	O15021	2626 aa		7.12	□□□□□ -1.27
PCDH15-223	ENST00000495484	MAP1LC3B2	A6NCE7	125 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484		I3L521	148 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	C8orf88	P0DMB2	117 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	ZP3	P21754	424 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	RPEL1	Q2QD12	228 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	LCN15	Q6UWW0	184 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	PATE2	Q6UY27	113 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	OR5B12	Q96R08	314 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	MAP1LC3B	Q9GZQ8	125 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	SLC25A22	Q9H936	323 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	MED9	Q9NWA0	146 aa		7.11	□□□□□ -1.27
PCDH15-223	ENST00000495484	CXorf1	O96002	111 aa		7.11	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms