RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RETNQ9HD89 108 aa8.97□□□□□ -0.97
CSNK1E-212ENST00000494610 ZNF355PQ9NSJ1 428 aa8.97□□□□□ -0.97
CSNK1E-212ENST00000494610 A0A0G2JLM5 398 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 IFNA7P01567 189 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 IGHV3-11P01762 117 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 NPBWR1P48145 328 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 RUNX1Q01196 453 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 TEPPQ6URK8 271 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 TMEM144Q7Z5S9 345 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 BAP18Q8IXM2 172 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 ZNF709Q8N972 641 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 OR5T1Q8NG75 326 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 TMEM170AQ8WVE7 144 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 USMG5Q96IX5 58 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 TXN2Q99757 166 aa8.96□□□□□ -0.98
CSNK1E-212ENST00000494610 TRAV30A0A087WSZ9 112 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 TRBV9A0A0B4J1U6 114 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 MT-CO2P00403 227 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 FGF7P21781 194 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 ARL16Q0P5N6 197 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 RPL7L1Q6DKI1 246 aaKnown RBP8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 ACSM6Q6P461 480 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 TMEM116Q8NCL8 245 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 ST8SIA2Q92186 375 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 EEF1AKMT3Q96AZ1 226 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 PSMG3Q9BT73 122 aaPredicted RBP8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 WDR61Q9GZS3 305 aaKnown RBP8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 FBXL7Q9UJT9 491 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 WDR83OSQ9Y284 106 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 TIMM9Q9Y5J7 89 aa8.95□□□□□ -0.98
CSNK1E-212ENST00000494610 TRBV7-1A0A0A6YYK4 115 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 LINC01619G3V211 115 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 I3L2K1 104 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 TRGV3P03979 118 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 FCGR2BP31994 310 aaPredicted RBP8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 RND2P52198 227 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 MFAP4P55083 255 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 TPPP2P59282 170 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 SELENOTP62341 195 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 RHOGP84095 191 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 MS4A10Q96PG2 267 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 FANCD2OSQ96PS1 177 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 FAM110AQ9BQ89 295 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 GINS3Q9BRX5 216 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 C21orf62Q9NYP8 219 aa8.94□□□□□ -0.98
CSNK1E-212ENST00000494610 HECTD4Q9Y4D8 3996 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 ZFP92A6NM28 416 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 K7EIM0 57 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 OR2J3O76001 311 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 MBP02144 154 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 SEC11BP0C7V7 166 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 S100A7P31151 101 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 MFAP2P55001 183 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 SERF2P84101 59 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 ATP5G2Q06055 141 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 GAMTQ14353 236 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 HAGHQ16775 308 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 C15orf32Q32M92 178 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 BTNL8Q6UX41 500 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 THAP8Q8NA92 274 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 HSD17B11Q8NBQ5 300 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 LRRC20Q8TCA0 184 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 ACY3Q96HD9 319 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 TRGV9Q99603 122 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 NPCDR1Q9BY65 106 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 ARV1Q9H2C2 271 aa8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 FNDC4Q9H6D8 234 aaPredicted RBP8.93□□□□□ -0.98
CSNK1E-212ENST00000494610 VPS13DQ5THJ4 4388 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 UMAD1C9J7I0 102 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 GNG7O60262 68 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 CLN5O75503 358 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 CFDP00746 253 aaPredicted RBP8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 CAMLGP49069 296 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 RAB5CP51148 216 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 DEFA5Q01523 94 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 Q56UQ5 140 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 SPSB3Q6PJ21 355 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 S100A7AQ86SG5 101 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 OR2G3Q8NGZ4 309 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 SCARB1Q8WTV0 552 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 BSCL2Q96G97 398 aaPredicted RBP8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 BOLA1Q9Y3E2 137 aa8.92□□□□□ -0.98
CSNK1E-212ENST00000494610 KIAA1109Q2LD37 5005 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 NUPL2O15504 423 aaKnown RBP8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 PRH1P02810 166 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 LGALS1P09382 135 aaKnown RBP8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 SPP1P10451 314 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 OR10J1P30954 320 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 AKR1C8PQ5T2L2 129 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 PXDC1Q5TGL8 231 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 DPPA3Q6W0C5 159 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 NPIPB3Q92617 1050 aa8.91□□□□□ -0.98
CSNK1E-212ENST00000494610 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms