RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 H3BRN7 92 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 K7EN84 100 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 HYPMO75409 117 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 TOMM40O96008 361 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 PFN1P07737 140 aaKnown RBP8.37□□□□□ -1.07
CLCN6-208ENST00000494028 IGHV4-38-2P0DP08 117 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 SLC25A16P16260 332 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 ORM2P19652 201 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 CRYBB3P26998 211 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 MYCNOSP40205 109 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 RPL35P42766 123 aaKnown RBP8.37□□□□□ -1.07
CLCN6-208ENST00000494028 GALR1P47211 349 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 DSCR9P59020 149 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 KLK9Q2XQG4 91 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 ZNF329Q86UD4 541 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 NECAP1Q8NC96 275 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 IGF2BP2-AS1Q96M15 143 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 PYGO2Q9BRQ0 406 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 KLK9Q9UKQ9 250 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 HIGD1AQ9Y241 93 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 MOB4Q9Y3A3 225 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 LY96Q9Y6Y9 160 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 S4R3C0 116 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 NDUFB8O95169 186 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 FABP1P07148 127 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
CLCN6-208ENST00000494028 ECSCRQ19T08 205 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 TEX38Q6PEX7 206 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 STXBP6Q8NFX7 210 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 OR5T1Q8NG75 326 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 SGMS2Q8NHU3 365 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 FAM210BQ96KR6 192 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 SAV1Q9H4B6 383 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-208ENST00000494028 BIN3Q9NQY0 253 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 AURKAIP1Q9NWT8 199 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-208ENST00000494028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLCN6-208ENST00000494028 DOPEY2Q9Y3R5 2298 aa8.36□□□□□ -1.07
CLCN6-208ENST00000494028 SH2D7A6NKC9 451 aaPredicted RBP8.35□□□□□ -1.07
CLCN6-208ENST00000494028 PEX7O00628 323 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 PPP1R2P9O14990 202 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 GGCTO75223 188 aaKnown RBP8.35□□□□□ -1.07
CLCN6-208ENST00000494028 OR2J3O76001 311 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 HNF1AP20823 631 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 SRP14P37108 136 aaKnown RBP8.35□□□□□ -1.07
CLCN6-208ENST00000494028 CLEC12BQ2HXU8 276 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 C19orf54Q5BKX5 351 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 SFRP2Q96HF1 295 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 ZNF414Q96IQ9 312 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 OR5B12Q96R08 314 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 TCEAL7Q9BRU2 100 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
CLCN6-208ENST00000494028 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 MRPL27Q9P0M9 148 aaKnown RBP8.35□□□□□ -1.07
CLCN6-208ENST00000494028 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
CLCN6-208ENST00000494028 TRAV20A0A0B4J274 112 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 WI2-2373I1.2A0A1W2PRP0 233 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 PHOX2AO14813 284 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 TGOLN2O43493 480 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 GNG7O60262 68 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 IGLV2-8P01709 118 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 RD3LP0DJH9 198 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 S100PP25815 95 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 FCGR2BP31994 310 aaPredicted RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 CRIP2P52943 208 aaPredicted RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 MFAP4P55083 255 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 SUMO1P63165 101 aaKnown RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 GNG5P63218 68 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 USF2Q15853 346 aaPredicted RBP8.34□□□□□ -1.07
CLCN6-208ENST00000494028 LEMD1Q68G75 181 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 UNQ5815/PRO19632Q6UWF5 114 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 TMEM219Q86XT9 240 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 OCC1Q8TAD7 63 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 RNF125Q96EQ8 232 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 MEGF9Q9H1U4 602 aa8.34□□□□□ -1.07
CLCN6-208ENST00000494028 TRAV30A0A087WSZ9 112 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 A0A1W2PPQ1 181 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 B4DSR2 109 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 AMY1AP04745 511 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 TYMSP04818 313 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 IL4P05112 153 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 GNG4P50150 75 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 SMUG1Q53HV7 270 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 Q56UQ5 140 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 ZNF491Q8N8L2 437 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 OR10G8Q8NGN5 311 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 SRD5A3Q9H8P0 318 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 HIF1ANQ9NWT6 349 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 THYN1Q9P016 225 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
CLCN6-208ENST00000494028 SOX21Q9Y651 276 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms