RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ZNF283Q8N7M2 679 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 MRPS24Q96EL2 167 aaKnown RBP2.83□□□□□ -1.96
SMC2-205ENST00000493955 Q9BRP9 147 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 LXNQ9BS40 222 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 NDUFB11Q9NX14 153 aa2.83□□□□□ -1.96
SMC2-205ENST00000493955 PAQR5Q9NXK6 330 aaPredicted RBP2.83□□□□□ -1.96
SMC2-205ENST00000493955 KIAA2026Q5HYC2 2103 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 EPG5Q9HCE0 2579 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 MUC22E2RYF6 1773 aaPredicted RBP2.82□□□□□ -1.96
SMC2-205ENST00000493955 ACACBO00763 2458 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 F5P12259 2224 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 ASCC3Q8N3C0 2202 aaKnown RBP2.82□□□□□ -1.96
SMC2-205ENST00000493955 TRGV4A0A0C4DH28 118 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 PQLC2LA1A4F0 135 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 S100A7P31151 101 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 EDDM3AQ14507 147 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 SS18Q15532 418 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 OR5J2Q8NH18 312 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 ULBP3Q9BZM4 244 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 MRPL27Q9P0M9 148 aaKnown RBP2.82□□□□□ -1.96
SMC2-205ENST00000493955 SPEGQ15772 3267 aa2.82□□□□□ -1.96
SMC2-205ENST00000493955 ICE1Q9Y2F5 2266 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 PI4KAP42356 2102 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 CACNA1GO43497 2377 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 A0A087WUJ7 227 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 A0A0J9YW62 118 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 CSRP1P21291 193 aaKnown RBP2.81□□□□□ -1.96
SMC2-205ENST00000493955 ARPP19P56211 112 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 PABPC1L2AQ5JQF8 200 aa2.81□□□□□ -1.96
SMC2-205ENST00000493955 RBM7Q9Y580 266 aaKnown RBP2.81□□□□□ -1.96
SMC2-205ENST00000493955 AKAP13Q12802 2813 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 MYH10P35580 1976 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 TRBV20OR9-2A0A075B6H5 130 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 A0A0J9YY10 115 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 A0A1B0GX78 115 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 HLA-DRB1P01911 266 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 TTRP02766 147 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 MRPS25P82663 173 aaKnown RBP2.8□□□□□ -1.96
SMC2-205ENST00000493955 SPA17Q15506 151 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 SLC35E3Q7Z769 313 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 GLTPQ9NZD2 209 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 CHD8Q9HCK8 2581 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 PLXNA2O75051 1894 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 MYO18AQ92614 2054 aaKnown RBP2.8□□□□□ -1.96
SMC2-205ENST00000493955 MYLKQ15746 1914 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 PCNX2A6NKB5 2137 aa2.8□□□□□ -1.96
SMC2-205ENST00000493955 CNOT1A5YKK6 2376 aaKnown RBP2.8□□□□□ -1.96
SMC2-205ENST00000493955 ZNF878C9JN71 531 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 LY6LH3BQJ8 138 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 LEPROTO15243 131 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 FADS1O60427 444 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 TFPTP0C1Z6 253 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 ALDH3A1P30838 453 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 SNRPD2P62316 118 aaKnown RBP2.79□□□□□ -1.96
SMC2-205ENST00000493955 ZNF90Q03938 601 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 DEFB124Q8NES8 71 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 ERMAPQ96PL5 475 aaPredicted RBP2.79□□□□□ -1.96
SMC2-205ENST00000493955 IMMP2LQ96T52 175 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 DCSTAMPQ9H295 470 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 PRTFDC1Q9NRG1 225 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 CISHQ9NSE2 258 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 FBXO5Q9UKT4 447 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 HHLA3Q9XRX5 114 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 WDR87Q6ZQQ6 2873 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 LAMA1P25391 3075 aa2.79□□□□□ -1.96
SMC2-205ENST00000493955 FAM208BQ5VWN6 2430 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 WDFY3Q8IZQ1 3526 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 SPAARA0A1B0GVQ0 90 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 FAAHO00519 579 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 HCRTO43612 131 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 CREBL2O60519 120 aaPredicted RBP2.78□□□□□ -1.96
SMC2-205ENST00000493955 PRB1P04280 392 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 RPL5P46777 297 aaKnown RBP2.78□□□□□ -1.96
SMC2-205ENST00000493955 HINT1P49773 126 aaPredicted RBP2.78□□□□□ -1.96
SMC2-205ENST00000493955 LPCAT3Q6P1A2 487 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 Q6ZS49 121 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 OR5B17Q8NGF7 314 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 OR4X2Q8NGF9 303 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 ZCCHC13Q8WW36 166 aaKnown RBP2.78□□□□□ -1.96
SMC2-205ENST00000493955 WDR61Q9GZS3 305 aaKnown RBP2.78□□□□□ -1.96
SMC2-205ENST00000493955 EFCAB1Q9HAE3 211 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 FUT9Q9Y231 359 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 CHD6Q8TD26 2715 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 IGF2RP11717 2491 aa2.78□□□□□ -1.96
SMC2-205ENST00000493955 ZZEF1O43149 2961 aa2.78□□□□□ -1.97
SMC2-205ENST00000493955 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 OR4C46A6NHA9 309 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 KLRC4O43908 158 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 CXCL8P10145 99 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 PSMB8P28062 276 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 KCNJ8Q15842 424 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 TMEM97Q5BJF2 176 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 LYZL1Q6UWQ5 148 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 ANKRD29Q8N6D5 301 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 OR51T1Q8NGJ9 327 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 BORCS7Q96B45 105 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 PRELID3BQ9Y3B1 194 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 TIMM9Q9Y5J7 89 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 CACNA1EQ15878 2313 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms