RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TIMM23O14925 209 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF324O75467 553 aaPredicted RBP8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 CELA3BP08861 270 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 IRF2P14316 349 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 CBLN1P23435 193 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 GPR6P46095 362 aaPredicted RBP8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 PRRX1P54821 245 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 RELBQ01201 579 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 C3orf36Q3SXR2 165 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 PET117Q6UWS5 81 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 STPG3Q8N7X2 389 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 ZNF114Q8NC26 417 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 NUP37Q8NFH4 326 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 OR2V2Q96R30 315 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 DERL1Q9BUN8 251 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 TMEM14BQ9NUH8 114 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 TCF19Q9Y242 345 aa8.53□□□□□ -1.04
PDLIM1-205ENST00000493949 TANC2Q9HCD6 1990 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 IZUMO1RA6ND01 250 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 OR9G9P0C7N8 305 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 GATA3P23771 443 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 SELENOVP59797 346 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 MRPS11P82912 194 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 KLF5Q13887 457 aaPredicted RBP8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 MSMPQ1L6U9 139 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 MBNL2Q5VZF2 373 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 WDR82Q6UXN9 313 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 OR5T1Q8NG75 326 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 OR4P4Q8NGL7 312 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 SLC25A40Q8TBP6 338 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 VN1R17PQ8TDU5 208 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 CACNG8Q8WXS5 425 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 DDB2Q92466 427 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 BORCS7Q96B45 105 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 GAL3ST2Q9H3Q3 398 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 SAP30LQ9HAJ7 183 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 PSG11Q9UQ72 335 aa8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
PDLIM1-205ENST00000493949 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 K7EN84 100 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 FCGR3BO75015 233 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 OR2J3O76001 311 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 TOMM40O96008 361 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 IGKV3-15P01624 115 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 CECR9P0C854 216 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 IGLC2P0DOY2 106 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 IGLC3P0DOY3 106 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 COL8A2P25067 703 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 G0S2P27469 103 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 IER3P46695 156 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 REG1BP48304 166 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 AMTP48728 403 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 KLF3P57682 345 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 AESQ08117 197 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 PSG7Q13046 419 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 BEAN1Q3B7T3 259 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 SPATA45Q537H7 98 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 CENPWQ5EE01 88 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 ARSJQ5FYB0 599 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 KPRPQ5T749 579 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 XP32Q5T750 250 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 MIC13Q5XKP0 118 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 ARL6IP6Q8N6S5 226 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 KLF14Q8TD94 323 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 MRGPRDQ8TDS7 321 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 C22orf15Q8WYQ4 148 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 ZNF714Q96N38 554 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 DUX5Q96PT3 197 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 ATG101Q9BSB4 218 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 KRTAP17-1Q9BYP8 105 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 GNB4Q9HAV0 340 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 TMEM140Q9NV12 185 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 PAM16Q9Y3D7 125 aa8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 TET2Q6N021 2002 aaPredicted RBP8.51□□□□□ -1.05
PDLIM1-205ENST00000493949 GRIFINA4D1Z8 144 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 VSTM5A8MXK1 200 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 SRRM5B3KS81 715 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 NUPR1O60356 82 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 GRPP07492 148 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 LINC00869P0C866 280 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 PMCHP20382 165 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 PRCDQ00LT1 54 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 C2orf83Q53S99 150 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 CT83Q5H943 113 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 IBA57Q5T440 356 aaKnown RBP8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 TCF23Q7RTU1 214 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 Q8N976 141 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 ZNF331Q9NQX6 463 aaPredicted RBP8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 BET1LQ9NYM9 111 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 GNG12Q9UBI6 72 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 FBXL7Q9UJT9 491 aa8.5□□□□□ -1.05
PDLIM1-205ENST00000493949 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms