RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
HDAC6-234ENST00000493923 IGKV1-27A0A075B6S5 117 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 TAX1BP3O14907 124 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 IGLC1P0CG04 106 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 CCL3L1P16619 93 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 CCL1P22362 96 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 GNG3P63215 75 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 LY6EQ16553 131 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 LRRC75BQ2VPJ9 315 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 CEACAM21Q3KPI0 293 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 PDLIM3Q53GG5 364 aaPredicted RBP6.56□□□□□ -1.36
HDAC6-234ENST00000493923 FFAR4Q5NUL3 377 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 ACP7Q6ZNF0 438 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 RNF144BQ7Z419 303 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 FAM58AQ8N1B3 248 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 DYNAPQ8N1N2 210 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 OR4F4Q96R69 305 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 KCNIP2Q9NS61 270 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 PLXNB1O43157 2135 aa6.56□□□□□ -1.36
HDAC6-234ENST00000493923 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 A6NDN8 102 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 GAGE10A6NGK3 116 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 SLC33A1O00400 549 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 MPPED1O15442 326 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 CHST1O43916 411 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF324O75467 553 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 LINC00869P0C866 280 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 LGALS7P47929 136 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 UBE2E1P51965 193 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 DLX6P56179 175 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 RUNX1Q01196 453 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF90Q03938 601 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM267Q0VDI3 215 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 SRSF7Q16629 238 aaKnown RBP eCLIP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 C5orf64Q2M2E5 130 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM42Q69YG0 159 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 SLC35E4Q6ICL7 350 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 CRIP3Q6Q6R5 217 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 ASCL4Q6XD76 172 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 C1orf122Q6ZSJ8 110 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 OR10G8Q8NGN5 311 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 PIFOQ8TCI5 191 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 ADAT3Q96EY9 351 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 SFRP2Q96HF1 295 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 EAF1Q96JC9 268 aaPredicted RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 SIGMAR1Q99720 223 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 WDR61Q9GZS3 305 aaKnown RBP6.55□□□□□ -1.36
HDAC6-234ENST00000493923 C16orf95Q9H693 158 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 PLEKHJ1Q9NW61 149 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 IL36RNQ9UBH0 155 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
HDAC6-234ENST00000493923 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 H3BUX3 64 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 M0R1W7 72 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 ANGPTL7O43827 346 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 NUPR1O60356 82 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 DHRS3O75911 302 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 CST7O76096 145 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 HLA-DQA1P01909 254 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 COX7A1P24310 79 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 NPY1RP25929 384 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 CD1BP29016 333 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 S100A7P31151 101 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 PRDX2P32119 198 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 OR3A4PP47883 348 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 ERVK11-1P61568 191 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 HIST1H1AQ02539 215 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-234ENST00000493923 RASL11AQ6T310 242 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 Q6ZSR3 168 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 FA2HQ7L5A8 372 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 TCF23Q7RTU1 214 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 SELENOHQ8IZQ5 122 aaKnown RBP6.54□□□□□ -1.36
HDAC6-234ENST00000493923 C11orf44Q8N8P7 122 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 OR4F17Q8NGA8 305 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 OR5D13Q8NGL4 314 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 FAM110DQ8TAY7 271 aaPredicted RBP6.54□□□□□ -1.36
HDAC6-234ENST00000493923 PP6455Q8WZ26 134 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 UHRF2Q96PU4 802 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 MS4A6AQ9H2W1 248 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 TP53TG3Q9ULZ0 132 aa6.54□□□□□ -1.36
HDAC6-234ENST00000493923 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 FAM90A26D6RGX4 464 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 H0Y980 276 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 H0YJW9 148 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 J3QT63 122 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 FCN1O00602 326 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 HAND1O96004 215 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 LINC00310P59036 64 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 RPEL1Q2QD12 228 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 SP6Q3SY56 376 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 PHLDA2Q53GA4 152 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 NMSQ5H8A3 153 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 BVES-AS1Q5T3Y7 98 aa6.53□□□□□ -1.36
HDAC6-234ENST00000493923 AMMECR1LQ6DCA0 310 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms