RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 TMED4Q7Z7H5 227 aa17.22■□□□□ 0.35
RHBDD3-206ENST00000493894 RNF125Q96EQ8 232 aa17.22■□□□□ 0.35
RHBDD3-206ENST00000493894 IGHV4-28A0A0C4DH34 117 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 DUXBA0A1W2PPF3 345 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 FAM90A26D6RGX4 464 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 KLF9Q13886 244 aaPredicted RBP17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 TOMM5Q8N4H5 51 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 OR51G1Q8NGK1 321 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 C2CD4CQ8TF44 421 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 TRIM63Q969Q1 353 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 SLC35E1Q96K37 410 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 RAB40CQ96S21 281 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 PBDC1Q9BVG4 233 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 HRH4Q9H3N8 390 aa17.21■□□□□ 0.35
RHBDD3-206ENST00000493894 AGRNO00468 2067 aa17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 ZFP92A6NM28 416 aa17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 ZNF705EA8MWA4 302 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 PYDC2Q56P42 97 aa17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 SEPSECSQ9HD40 501 aaKnown RBP17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 PFDN2Q9UHV9 154 aa17.2■□□□□ 0.34
RHBDD3-206ENST00000493894 TMEM128Q5BJH2 165 aa17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 OR8G2PQ6IF36 304 aa17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 RPP25LQ8N5L8 163 aaKnown RBP17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 CLEC5AQ9NY25 188 aa17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 TBC1D24Q9ULP9 559 aa17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 KMT2AQ03164 3969 aa17.19■□□□□ 0.34
RHBDD3-206ENST00000493894 C11orf94C9JXX5 98 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 DEDDO75618 318 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 FABP1P07148 127 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 RBMY1A1P0DJD3 496 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 RBMY1CP0DJD4 496 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 VAMP1P23763 118 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 GPX4P36969 197 aaPredicted RBP17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 TCTAP57738 103 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 NUTF2P61970 127 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 RBMY1FQ15415 496 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 V9GYH0 126 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 X6R8D5 127 aa17.18■□□□□ 0.34
RHBDD3-206ENST00000493894 GAMTQ14353 236 aa17.17■□□□□ 0.34
RHBDD3-206ENST00000493894 CENPSQ8N2Z9 138 aa17.17■□□□□ 0.34
RHBDD3-206ENST00000493894 C1QTNF4Q9BXJ3 329 aa17.17■□□□□ 0.34
RHBDD3-206ENST00000493894 PITX3O75364 302 aa17.16■□□□□ 0.34
RHBDD3-206ENST00000493894 RAB11AP62491 216 aa17.16■□□□□ 0.34
RHBDD3-206ENST00000493894 CSNK1G2-AS1Q8NCQ2 148 aa17.16■□□□□ 0.34
RHBDD3-206ENST00000493894 DEDD2Q8WXF8 326 aa17.16■□□□□ 0.34
RHBDD3-206ENST00000493894 SLC25A21Q9BQT8 299 aaPredicted RBP17.16■□□□□ 0.34
RHBDD3-206ENST00000493894 IGKV1D-37A0A075B6S9 117 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 CCDC160A6NGH7 325 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 IAPPP10997 89 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 SLC25A6P12236 298 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 S100A5P33763 92 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 ZNF90Q03938 601 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 LRTM2Q8N967 370 aa17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 PAIP2BQ9ULR5 123 aaKnown RBP17.15■□□□□ 0.34
RHBDD3-206ENST00000493894 H3BMM0 161 aa17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 MED6O75586 246 aa17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 HLA-DMBP28068 263 aa17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 NKX2-1P43699 371 aaPredicted RBP17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 LYZP61626 148 aa17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 ZNF79Q15937 498 aa17.14■□□□□ 0.33
RHBDD3-206ENST00000493894 IGLL5B9A064 214 aa17.13■□□□□ 0.33
RHBDD3-206ENST00000493894 HLA-DRB4P13762 266 aa17.13■□□□□ 0.33
RHBDD3-206ENST00000493894 TMED3Q9Y3Q3 217 aa17.13■□□□□ 0.33
RHBDD3-206ENST00000493894 HLA-DRB4X5D2U9 266 aa17.13■□□□□ 0.33
RHBDD3-206ENST00000493894 ELOA3CA0A087WX78 387 aaPredicted RBP17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 SNRPGP15A8MWD9 76 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 RPP30P78346 268 aaKnown RBP17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 PPP1R1AQ13522 171 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 C1orf194Q5T5A4 169 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 Q6ZTC4 211 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 PPP1R14BQ96C90 147 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 CIB3Q96Q77 187 aaPredicted RBP17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 XCL2Q9UBD3 114 aa17.12■□□□□ 0.33
RHBDD3-206ENST00000493894 TRAV10A0A0B4J240 114 aa17.11■□□□□ 0.33
RHBDD3-206ENST00000493894 SFT2D2O95562 160 aa17.11■□□□□ 0.33
RHBDD3-206ENST00000493894 OR2F1Q13607 317 aa17.11■□□□□ 0.33
RHBDD3-206ENST00000493894 TRGV9Q99603 122 aa17.11■□□□□ 0.33
RHBDD3-206ENST00000493894 FRAS1Q86XX4 4008 aa17.11■□□□□ 0.33
RHBDD3-206ENST00000493894 ID1P41134 155 aa17.1■□□□□ 0.33
RHBDD3-206ENST00000493894 PSMB3P49720 205 aa17.1■□□□□ 0.33
RHBDD3-206ENST00000493894 CCDC190Q86UF4 302 aa17.1■□□□□ 0.33
RHBDD3-206ENST00000493894 COQ8AQ8NI60 647 aa17.1■□□□□ 0.33
RHBDD3-206ENST00000493894 APLNQ9ULZ1 77 aa17.1■□□□□ 0.33
RHBDD3-206ENST00000493894 SYNGR2O43760 224 aa17.09■□□□□ 0.33
RHBDD3-206ENST00000493894 THAP8Q8NA92 274 aa17.09■□□□□ 0.33
RHBDD3-206ENST00000493894 LINC00052Q96N35 136 aa17.09■□□□□ 0.33
RHBDD3-206ENST00000493894 WDR12Q9GZL7 423 aaKnown RBP17.09■□□□□ 0.33
RHBDD3-206ENST00000493894 MAGT1Q9H0U3 335 aa17.09■□□□□ 0.33
RHBDD3-206ENST00000493894 VPS13DQ5THJ4 4388 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 IGKV1OR2-108A0A075B7D4 117 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 HOXB5P09067 269 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 FOXI2Q6ZQN5 318 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 OR8I2Q8N0Y5 310 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 SAV1Q9H4B6 383 aaPredicted RBP17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 CELA1Q9UNI1 258 aa17.08■□□□□ 0.32
RHBDD3-206ENST00000493894 WRBO00258 174 aa17.07■□□□□ 0.32
RHBDD3-206ENST00000493894 SOCS3O14543 225 aa17.07■□□□□ 0.32
RHBDD3-206ENST00000493894 CFDP00746 253 aaPredicted RBP17.07■□□□□ 0.32
RHBDD3-206ENST00000493894 SPANXN2Q5MJ10 180 aa17.07■□□□□ 0.32
RHBDD3-206ENST00000493894 GDF5OSQ5U4N7 250 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms