RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 NPIPB3Q92617 1050 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 IL22RA2Q969J5 263 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 RAB40CQ96S21 281 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 PRRT1Q99946 306 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 NRN1Q9NPD7 142 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 PRR13Q9NZ81 148 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 GPR132Q9UNW8 380 aa6.59□□□□□ -1.35
NFIA-213ENST00000493627 IGHV4-4A0A075B6R2 117 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 CTDSPLO15194 276 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 BUB3O43684 328 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 AMBPP02760 352 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 RD3LP0DJH9 198 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 IL18Q14116 193 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 SIGLEC15Q6ZMC9 328 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 CLVS1Q8IUQ0 354 aaPredicted RBP6.58□□□□□ -1.36
NFIA-213ENST00000493627 OR51S1Q8NGJ8 323 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 C1QTNF4Q9BXJ3 329 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 CELA1Q9UNI1 258 aa6.58□□□□□ -1.36
NFIA-213ENST00000493627 ANKRD20A5PA0PJZ0 165 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 IFNA10P01566 189 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 PSG1P11464 419 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 NUP62P37198 522 aaPredicted RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 ALDH3B2P48448 385 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 CCR6P51684 374 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 NUTF2P61970 127 aaKnown RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 ZNF767PQ75MW2 155 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 LGI3Q8N145 548 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 OR51G1Q8NGK1 321 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 DTD1Q8TEA8 209 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 RNF125Q96EQ8 232 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 DIRAS2Q96HU8 199 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 RNF126Q9BV68 326 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 MRPS26Q9BYN8 205 aaKnown RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 SEPSECSQ9HD40 501 aaKnown RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 CCDC59Q9P031 241 aaKnown RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 XCL2Q9UBD3 114 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 RABL2AQ9UBK7 228 aaPredicted RBP6.57□□□□□ -1.36
NFIA-213ENST00000493627 HSPB7Q9UBY9 170 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 RABL2BQ9UNT1 228 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 KCNIP3Q9Y2W7 256 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
NFIA-213ENST00000493627 AGRNO00468 2067 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 DNAH11Q96DT5 4516 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 A0A0B4J2A0 478 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 H3BMM0 161 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 SUPT4H1P63272 117 aaKnown RBP6.56□□□□□ -1.36
NFIA-213ENST00000493627 SMCO1Q147U7 214 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 OR8G2PQ6IF36 304 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 RAB2BQ8WUD1 216 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 SCGB3A2Q96PL1 93 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 PBDC1Q9BVG4 233 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 RBKSQ9H477 322 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 MCUBQ9NWR8 336 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 SHPKQ9UHJ6 478 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 U3KQ87 197 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 KIAA1109Q2LD37 5005 aa6.56□□□□□ -1.36
NFIA-213ENST00000493627 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
NFIA-213ENST00000493627 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 ZFP92A6NM28 416 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 ANXA3P12429 323 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 AKR1C4P17516 323 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 NKX2-1P43699 371 aaPredicted RBP6.55□□□□□ -1.36
NFIA-213ENST00000493627 DEFB1P60022 68 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 LYZP61626 148 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 SRPXP78539 464 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 ZNF90Q03938 601 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 KLF9Q13886 244 aaPredicted RBP6.55□□□□□ -1.36
NFIA-213ENST00000493627 GDF5OSQ5U4N7 250 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 LYZL2Q7Z4W2 148 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 DYNC2LI1Q8TCX1 351 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 SLC35E1Q96K37 410 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 WDR12Q9GZL7 423 aaKnown RBP6.55□□□□□ -1.36
NFIA-213ENST00000493627 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
NFIA-213ENST00000493627 IGKV1D-37A0A075B6S9 117 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 IGKV3-20P01619 116 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 FABP1P07148 127 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 GPX4P36969 197 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 PSMB3P49720 205 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 ATP5IP56385 69 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 GAMTQ14353 236 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 FOXI2Q6ZQN5 318 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 OR1S1Q8NH92 325 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 COQ8AQ8NI60 647 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 LINC00052Q96N35 136 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
NFIA-213ENST00000493627 SAV1Q9H4B6 383 aaPredicted RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 RSL24D1Q9UHA3 163 aaKnown RBP6.54□□□□□ -1.36
NFIA-213ENST00000493627 IGHV3OR16-12A0A075B7B8 117 aa6.53□□□□□ -1.36
NFIA-213ENST00000493627 PIGBOS1A0A0B4J2F0 54 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms