RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 IL4P05112 153 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 HOXB5P09067 269 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 INPP1P49441 399 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 CMC4P56277 68 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-214ENST00000493608 YPEL3P61236 119 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-214ENST00000493608 PPP1R1AQ13522 171 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 USF2Q15853 346 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-214ENST00000493608 ETFRF1Q6IPR1 90 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 LYG2Q86SG7 212 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 NOXA1Q86UR1 476 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 KIR2DL5AQ8N109 375 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 KIR2DL5BQ8NHK3 375 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 IL17DQ8TAD2 202 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 RNF183Q96D59 192 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 SLC25A21Q9BQT8 299 aaPredicted RBP7.84□□□□□ -1.15
COL6A3-214ENST00000493608 MAGT1Q9H0U3 335 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 CSTL1Q9H114 145 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 TMEM231Q9H6L2 316 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 PAIP2BQ9ULR5 123 aaKnown RBP7.84□□□□□ -1.15
COL6A3-214ENST00000493608 FLVCR2Q9UPI3 526 aa7.84□□□□□ -1.15
COL6A3-214ENST00000493608 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-214ENST00000493608 PITX3O75364 302 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 CD5P06127 495 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 HNRNPCP07910 306 aaKnown RBP eCLIP7.83□□□□□ -1.16
COL6A3-214ENST00000493608 ZNF688P0C7X2 276 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 RD3LP0DJH9 198 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 PMS2P11Q13670 270 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 TRIQKQ629K1 86 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 CENPSQ8N2Z9 138 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 NARS2Q96I59 477 aaKnown RBP7.83□□□□□ -1.16
COL6A3-214ENST00000493608 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-214ENST00000493608 CACFD1Q9UGQ2 172 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 TP53TG1Q9Y2A0 90 aa7.83□□□□□ -1.16
COL6A3-214ENST00000493608 DUXBA0A1W2PPF3 345 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 KNCNA6PVL3 124 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 MPTX1A8MV57 137 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 NPIPB6E9PJ23 425 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 K7EQG2 157 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 PSG1P11464 419 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 GAMTQ14353 236 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 GGNBP1Q5YKI7 109 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 C16orf54Q6UWD8 224 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 GSG1LQ6UXU4 331 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 LRTM2Q8N967 370 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 OR51G1Q8NGK1 321 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 GRAMD2BQ96HH9 432 aa7.82□□□□□ -1.16
COL6A3-214ENST00000493608 IGKV1D-37A0A075B6S9 117 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 TRAV2A0A0B4J234 112 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 CXorf65A6NEN9 183 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 ZFP92A6NM28 416 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 WRBO00258 174 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 ADAP1O75689 374 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 TOMM40O96008 361 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 CA1P00915 261 aaPredicted RBP7.81□□□□□ -1.16
COL6A3-214ENST00000493608 ZNF90Q03938 601 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 DHRS2Q13268 280 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 OR2F1Q13607 317 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 STHQ8IWL8 128 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 DCANP1Q8TF63 244 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 GLMPQ8WWB7 406 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 SLC35E1Q96K37 410 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 RARRES2Q99969 163 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 PBDC1Q9BVG4 233 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 TMED3Q9Y3Q3 217 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
COL6A3-214ENST00000493608 C9orf170A2RU37 121 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 DEFB4AO15263 64 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 SYNGR2O43760 224 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 NDUFB6O95139 128 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 GPX4P36969 197 aaPredicted RBP7.8□□□□□ -1.16
COL6A3-214ENST00000493608 RAB11AP62491 216 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 OR11H2Q8NH07 326 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 DEDD2Q8WXF8 326 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 RNF125Q96EQ8 232 aa7.8□□□□□ -1.16
COL6A3-214ENST00000493608 PIGBOS1A0A0B4J2F0 54 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 HELTA6NFD8 242 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 NAP1L6A6NFF2 107 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 FAM90A26D6RGX4 464 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 H3BP45 60 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 RGS13O14921 159 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 BUB3O43684 328 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 MED6O75586 246 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 OR4E1P0C645 316 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 SLC25A6P12236 298 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 IL7P13232 177 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 ANXA7P20073 488 aaKnown RBP7.79□□□□□ -1.16
COL6A3-214ENST00000493608 BTCP35070 178 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 EIF2B2P49770 351 aaKnown RBP7.79□□□□□ -1.16
COL6A3-214ENST00000493608 ATP5IP56385 69 aaPredicted RBP7.79□□□□□ -1.16
COL6A3-214ENST00000493608 LYZP61626 148 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 PSMG4Q5JS54 123 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 ACTL10Q5JWF8 245 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 SPANXN5Q5MJ07 72 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 SIGLEC15Q6ZMC9 328 aa7.79□□□□□ -1.16
COL6A3-214ENST00000493608 IGKV1OR2-108A0A075B7D4 117 aa7.78□□□□□ -1.16
COL6A3-214ENST00000493608 CENPXA8MT69 81 aa7.78□□□□□ -1.16
COL6A3-214ENST00000493608 JTBO76095 146 aa7.78□□□□□ -1.16
COL6A3-214ENST00000493608 GIG44P09565 113 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-214ENST00000493608 AP2S1P53680 142 aaPredicted RBP7.78□□□□□ -1.16
COL6A3-214ENST00000493608 UBE2MP61081 183 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms