RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NDUFA4O00483 81 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 AGPAT2O15120 278 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 TOMM40O96008 361 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 PSG1P11464 419 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 CAMLGP49069 296 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
LIME1-208ENST00000493265 RAB31Q13636 194 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 TOMM20LQ6UXN7 152 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
LIME1-208ENST00000493265 GPHB5Q86YW7 130 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 PBDC1Q9BVG4 233 aa13.14□□□□□ -0.31
LIME1-208ENST00000493265 OVOL1O14753 267 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 IL4P05112 153 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 LYZP61626 148 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 TM4SF20Q53R12 229 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 WDR61Q9GZS3 305 aaKnown RBP13.13□□□□□ -0.31
LIME1-208ENST00000493265 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
LIME1-208ENST00000493265 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
LIME1-208ENST00000493265 IGHV3-49A0A0A0MS15 119 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 A0A0D9SG52 128 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 CD33P20138 364 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 EDN2P20800 178 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 ZNF345Q14585 488 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 MIC13Q5XKP0 118 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
LIME1-208ENST00000493265 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 DOK5Q9P104 306 aa13.12□□□□□ -0.31
LIME1-208ENST00000493265 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 LGALSLQ3ZCW2 172 aaPredicted RBP13.11□□□□□ -0.31
LIME1-208ENST00000493265 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 ZNF709Q8N972 641 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 HSD17B11Q8NBQ5 300 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 OR9G4Q8NGQ1 327 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 ARPC5LQ9BPX5 153 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 RSG1Q9BU20 258 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 ZFAND3Q9H8U3 227 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 SLC45A2Q9UMX9 530 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 SELENOKQ9Y6D0 94 aa13.11□□□□□ -0.31
LIME1-208ENST00000493265 IGHV3OR16-13A0A075B7E8 117 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 IGHV3-74A0A0B4J1X5 117 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 KANTRA0A1W2PQU2 76 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 LINC00869P0C866 280 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 ORM2P19652 201 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 SELENOTP62341 195 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 ZNF266Q14584 549 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 OR1B1Q8NGR6 318 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
LIME1-208ENST00000493265 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 BOLA2-SMG1P6H3BVE0 249 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 LGALS9O00182 355 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 TAAR5O14804 337 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 BCL2L11O43521 198 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 MPDU1O75352 247 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 OPCMLQ14982 345 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
LIME1-208ENST00000493265 STPG3Q8N7X2 389 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 ELOVL1Q9BW60 279 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
LIME1-208ENST00000493265 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
LIME1-208ENST00000493265 IGHV3-66A0A0C4DH42 116 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 TMEM213A2RRL7 107 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 SEC14L6B5MCN3 397 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 C17orf112F2Z3M2 114 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 SAP30O75446 220 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 OR5G3P0C626 314 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 C9orf62Q8N4C0 152 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 PPP1R14BQ96C90 147 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 METTL26Q96S19 204 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 DAZ1Q9NQZ3 744 aaKnown RBP13.08□□□□□ -0.32
LIME1-208ENST00000493265 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
LIME1-208ENST00000493265 FOLR2P14207 255 aa13.07□□□□□ -0.32
LIME1-208ENST00000493265 NPPCP23582 126 aa13.07□□□□□ -0.32
LIME1-208ENST00000493265 RPL29P47914 159 aaKnown RBP13.07□□□□□ -0.32
LIME1-208ENST00000493265 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
LIME1-208ENST00000493265 B2MP61769 119 aa13.07□□□□□ -0.32
LIME1-208ENST00000493265 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
LIME1-208ENST00000493265 SLC39A9Q9NUM3 307 aa13.07□□□□□ -0.32
LIME1-208ENST00000493265 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
LIME1-208ENST00000493265 A8MWP6 167 aa13.06□□□□□ -0.32
LIME1-208ENST00000493265 K7EMT4 169 aa13.06□□□□□ -0.32
LIME1-208ENST00000493265 COX7A2P2O60397 106 aa13.06□□□□□ -0.32
LIME1-208ENST00000493265 HYPMO75409 117 aa13.06□□□□□ -0.32
LIME1-208ENST00000493265 JTBO76095 146 aa13.06□□□□□ -0.32
LIME1-208ENST00000493265 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
LIME1-208ENST00000493265 APOHP02749 345 aaPredicted RBP13.06□□□□□ -0.32
LIME1-208ENST00000493265 CSN3P07498 182 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms