RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
LRTM1-202ENST00000493075 PFDN2Q9UHV9 154 aa8.42□□□□□ -1.06
LRTM1-202ENST00000493075 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 NAP1L6A6NFF2 107 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 MED6O75586 246 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 NUP62P37198 522 aaPredicted RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 RAB11AP62491 216 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 GAMTQ14353 236 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 USF2Q15853 346 aaPredicted RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 MORN3Q6PF18 240 aaPredicted RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 TRPT1Q86TN4 253 aaKnown RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 CENPSQ8N2Z9 138 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 OR11H2Q8NH07 326 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 CIB3Q96Q77 187 aaPredicted RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 C11orf68Q9H3H3 251 aaKnown RBP8.41□□□□□ -1.06
LRTM1-202ENST00000493075 DNAH1Q9P2D7 4330 aa8.41□□□□□ -1.06
LRTM1-202ENST00000493075 CA1P00915 261 aaPredicted RBP8.4□□□□□ -1.06
LRTM1-202ENST00000493075 FABP1P07148 127 aa8.4□□□□□ -1.06
LRTM1-202ENST00000493075 SPP1P10451 314 aa8.4□□□□□ -1.06
LRTM1-202ENST00000493075 RPP30P78346 268 aaKnown RBP8.4□□□□□ -1.06
LRTM1-202ENST00000493075 DHRS2Q13268 280 aa8.4□□□□□ -1.06
LRTM1-202ENST00000493075 PPP1R1AQ13522 171 aa8.4□□□□□ -1.06
LRTM1-202ENST00000493075 KLK5Q9Y337 293 aaPredicted RBP8.4□□□□□ -1.06
LRTM1-202ENST00000493075 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 A6NHS1 94 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 ZFP92A6NM28 416 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 SNRPGP15A8MWD9 76 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 SYNGR2O43760 224 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
LRTM1-202ENST00000493075 ZNF688P0C7X2 276 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 PMS2P11Q13670 270 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 BAK1Q16611 211 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 SIGLEC15Q6ZMC9 328 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 RNF125Q96EQ8 232 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 MFFQ9GZY8 342 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 NRN1Q9NPD7 142 aa8.39□□□□□ -1.07
LRTM1-202ENST00000493075 C9orf170A2RU37 121 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 NDUFB6O95139 128 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 CFDP00746 253 aaPredicted RBP8.38□□□□□ -1.07
LRTM1-202ENST00000493075 INPP1P49441 399 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
LRTM1-202ENST00000493075 ZNF90Q03938 601 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 GGNBP1Q5YKI7 109 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 THAP8Q8NA92 274 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 TRGV9Q99603 122 aa8.38□□□□□ -1.07
LRTM1-202ENST00000493075 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
LRTM1-202ENST00000493075 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 HOXB5P09067 269 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 IAPPP10997 89 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PRR20EP86478 221 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PRR20CP86479 221 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PRR20DP86480 221 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PRR20BP86481 221 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PRR20AP86496 221 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 ID3Q02535 119 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 CNPY1Q3B7I2 92 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PSMG4Q5JS54 123 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 TRIQKQ629K1 86 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 PHLDA1Q8WV24 401 aaPredicted RBP8.37□□□□□ -1.07
LRTM1-202ENST00000493075 LINC00476Q8WZB0 136 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 C7orf50Q9BRJ6 194 aaKnown RBP8.37□□□□□ -1.07
LRTM1-202ENST00000493075 NDUFA13Q9P0J0 144 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 FBXL17Q9UF56 701 aa8.37□□□□□ -1.07
LRTM1-202ENST00000493075 CENPXA8MT69 81 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
LRTM1-202ENST00000493075 PRSS46E5RG02 174 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 WRBO00258 174 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 NKX2-1P43699 371 aaPredicted RBP8.36□□□□□ -1.07
LRTM1-202ENST00000493075 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
LRTM1-202ENST00000493075 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 COQ8AQ8NI60 647 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 SDHCQ99643 169 aaPredicted RBP8.36□□□□□ -1.07
LRTM1-202ENST00000493075 PBDC1Q9BVG4 233 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 MAGT1Q9H0U3 335 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 HRH4Q9H3N8 390 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 SLC45A2Q9UMX9 530 aa8.36□□□□□ -1.07
LRTM1-202ENST00000493075 IGKV1OR2-108A0A075B7D4 117 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 H3BMM0 161 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 IFNA21P01568 189 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 OR4E1P0C645 316 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 MIFP14174 115 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 ID1P41134 155 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 Q8NAQ8 132 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
LRTM1-202ENST00000493075 FLVCR2Q9UPI3 526 aa8.35□□□□□ -1.07
LRTM1-202ENST00000493075 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
LRTM1-202ENST00000493075 ADAP1O75689 374 aa8.34□□□□□ -1.07
LRTM1-202ENST00000493075 C4BPBP20851 252 aa8.34□□□□□ -1.07
LRTM1-202ENST00000493075 TCTAP57738 103 aa8.34□□□□□ -1.07
LRTM1-202ENST00000493075 NANOS2P60321 138 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms