RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PSMB3P49720 205 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 DYNLT3P51808 116 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 TPPP2P59282 170 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 ERVK-16P61578 105 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 ENDOGQ14249 297 aaKnown RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 TMEM183BQ1AE95 376 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 SP6Q3SY56 376 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 KLF17Q5JT82 389 aaPredicted RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 ZNF880Q6PDB4 577 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 ZNF705AQ6ZN79 300 aaPredicted RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 TEX43Q6ZNM6 134 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 DEFB128Q7Z7B8 93 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 PPP1R27Q86WC6 154 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 PRSS33Q8NF86 280 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 OR10G6Q8NH81 332 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 ORAOV1Q8WV07 137 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 APOBEC3DQ96AK3 386 aaPredicted RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 PGLYRP4Q96LB8 373 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 LINC00477Q96M19 166 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 HIST1H4GQ99525 98 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 SMIM7Q9BQ49 75 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 OR2J1Q9GZK6 312 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 MANBALQ9NQG1 85 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 CBLN4Q9NTU7 201 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 GNG13Q9P2W3 67 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 SPRR3Q9UBC9 169 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 MCTS1Q9ULC4 181 aaKnown RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 ST3GAL6Q9Y274 331 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 YTHDF2Q9Y5A9 579 aaKnown RBP3.69□□□□□ -1.82
RTN4-215ENST00000491592 TIMM9Q9Y5J7 89 aa3.69□□□□□ -1.82
RTN4-215ENST00000491592 ARID1AO14497 2285 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 COL5A1P20908 1838 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 LTBP2Q14767 1821 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGKV1D-8A0A087WSZ0 117 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGHV4-61A0A0C4DH41 118 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGKV1-9A0A0C4DH69 117 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 LOC102725191A0A1B0GVB3 256 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 RBMY1BA6NDE4 496 aaKnown RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 RBMY1EA6NEQ0 496 aaKnown RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 CEBPZOSA8MTT3 80 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 ZNF705FA8MVS1 300 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 TCF21O43680 179 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 SSSCA1O60232 199 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 ZNF737O75373 536 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 DHRS3O75911 302 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGHV4-59P01825 116 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGHG2P01859 326 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 HBZP02008 142 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 IGKV3-11P04433 115 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 RBMY1DP0C7P1 496 aaKnown RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 ZNF705DP0CH99 300 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 ZNF705BP0CI00 300 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 RBMY1A1P0DJD3 496 aaKnown RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 GUCA1AP43080 201 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 LINC01547P58512 204 aaPredicted RBP3.68□□□□□ -1.82
RTN4-215ENST00000491592 DAD1P61803 113 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 LY6DQ14210 128 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 ADIRFQ15847 76 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 NNATQ16517 81 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OCIAD2Q56VL3 154 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 MUC21Q5SSG8 566 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 FAM201AQ5SY85 155 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 SLC35E4Q6ICL7 350 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 C6orf201Q7Z4U5 140 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 ZNF843Q8N446 348 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 STPG4Q8N801 248 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 TSTD1Q8NFU3 115 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OR4B1Q8NGF8 309 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OR10G8Q8NGN5 311 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OR1N2Q8NGR9 330 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OR1L1Q8NH94 360 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 CT55Q8WUE5 264 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 OR5P3Q8WZ94 311 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 GPR146Q96CH1 333 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 REEP6Q96HR9 211 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 FAM19A4Q96LR4 140 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 SPACA5Q96QH8 159 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 TXNDC17Q9BRA2 123 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 SRXN1Q9BYN0 137 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 RPRMQ9NS64 109 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 SLC39A9Q9NUM3 307 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 TBX21Q9UL17 535 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 FUT9Q9Y231 359 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 LHFPL6Q9Y693 200 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 PXMP4Q9Y6I8 212 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 MYO7BQ6PIF6 2116 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 PCNX3Q9H6A9 2034 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 ATG2AQ2TAZ0 1938 aa3.68□□□□□ -1.82
RTN4-215ENST00000491592 DOCK8Q8NF50 2099 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 TRAV8-6A0A0B4J262 113 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 ZFP92A6NM28 416 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 YPEL1O60688 119 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 PDCD6O75340 191 aa3.67□□□□□ -1.82
RTN4-215ENST00000491592 CST7O76096 145 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms