RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 PSG1P11464 419 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 TCTE3Q8IZS6 198 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 DYNLRB2Q8TF09 96 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 SLC45A2Q9UMX9 530 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 WDR83OSQ9Y284 106 aa15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 LSM4Q9Y4Z0 139 aaKnown RBP15.14■□□□□ 0.01
SHROOM3-209ENST00000490690 IGKV1D-37A0A075B6S9 117 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 IL4P05112 153 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 NPPCP23582 126 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 UNQ9165/PRO28630Q6UXU0 137 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 CYP2G1PQ6ZSU1 146 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 RNF125Q96EQ8 232 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 GRAMD2BQ96HH9 432 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 TNFSF18Q9UNG2 199 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 DNHD1Q96M86 4753 aa15.13■□□□□ 0.01
SHROOM3-209ENST00000490690 hCG_2014768A0A024R1R8 64 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 IGKV1OR2-108A0A075B7D4 117 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 UBE2L5PA0A1B0GUS4 154 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 TMEM213A2RRL7 107 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 HMSDA8MTL9 139 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 C17orf112F2Z3M2 114 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 CSN3P07498 182 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 C8orf88P0DMB2 117 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 FOLR2P14207 255 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 IGLL1P15814 213 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 CBLN1P23435 193 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 CAMLGP49069 296 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 ZNF709Q8N972 641 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 ZFAND3Q9H8U3 227 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 RABAC1Q9UI14 185 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 TRRAPQ9Y4A5 3859 aa15.12■□□□□ 0.01
SHROOM3-209ENST00000490690 TAAR5O14804 337 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 EIF2B2P49770 351 aaKnown RBP15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 ZNF90Q03938 601 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 OR2F1Q13607 317 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 CLINT1Q14677 625 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 LAMTOR1Q6IAA8 161 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 BTNL8Q6UX41 500 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 Q6ZRG5 221 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 SCGB1C1Q8TD33 95 aa15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 PARD6GQ9BYG4 376 aaPredicted RBP15.11■□□□□ 0.01
SHROOM3-209ENST00000490690 IGHV7-4-1A0A0J9YVY3 117 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 WI2-2373I1.2A0A1W2PRP0 233 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 AGPAT2O15120 278 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 HNRNPCP07910 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 FGF7P21781 194 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 CRYBB3P26998 211 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 ZNF345Q14585 488 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 TM4SF20Q53R12 229 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 LCN12Q6JVE5 192 aa15.1■□□□□ 0.01
SHROOM3-209ENST00000490690 TRAV25A0A0B4J276 109 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 ARPC5O15511 151 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 IGLV1-51P01701 117 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 RPL29P47914 159 aaKnown RBP15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 LYZP61626 148 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 Q5BKY6 102 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 SAMD5Q5TGI4 173 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 IL34Q6ZMJ4 242 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 ST6GAL2Q96JF0 529 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 PBDC1Q9BVG4 233 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 MFFQ9GZY8 342 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 SMPXQ9UHP9 88 aa15.09■□□□□ 0.01
SHROOM3-209ENST00000490690 BORCS7-ASMTA0A0B4J1R7 106 aa15.08■□□□□ 0
SHROOM3-209ENST00000490690 A0A0D9SG52 128 aa15.08■□□□□ 0
SHROOM3-209ENST00000490690 LINC00869P0C866 280 aa15.08■□□□□ 0
SHROOM3-209ENST00000490690 PLP1P60201 277 aa15.08■□□□□ 0
SHROOM3-209ENST00000490690 PFDN5Q99471 154 aa15.08■□□□□ 0
SHROOM3-209ENST00000490690 WDR61Q9GZS3 305 aaKnown RBP15.08■□□□□ 0
SHROOM3-209ENST00000490690 ELOA3CA0A087WX78 387 aaPredicted RBP15.07■□□□□ 0
SHROOM3-209ENST00000490690 G3V3Q6 166 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 RBPMS2Q6ZRY4 209 aaKnown RBP15.07■□□□□ 0
SHROOM3-209ENST00000490690 OR1L4Q8NGR5 311 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 PPP1R14BQ96C90 147 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 HYLS1Q96M11 299 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 MGST2Q99735 147 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 RHPN1-AS1Q9BWJ2 59 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 NPCDR1Q9BY65 106 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 FBXL17Q9UF56 701 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 MGAM2Q2M2H8 2515 aa15.07■□□□□ 0
SHROOM3-209ENST00000490690 NOTCH3Q9UM47 2321 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 RNF222A6NCQ9 220 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 HELTA6NFD8 242 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 HYPMO75409 117 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 C1QBP02746 253 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 OPCMLQ14982 345 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 USF2Q15853 346 aaPredicted RBP15.06■□□□□ 0
SHROOM3-209ENST00000490690 C1orf194Q5T5A4 169 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 GGTLC1Q9BX51 225 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 SMIM3Q9BZL3 60 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 VSIRQ9H7M9 311 aa15.06■□□□□ 0
SHROOM3-209ENST00000490690 CHEK1O14757 476 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 JTBO76095 146 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 B2MP61769 119 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 PAFAH1B2P68402 229 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 EGFEM1PQ0D2K5 195 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 DEFB114Q30KQ6 69 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 OXLD1Q5BKU9 147 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 STPG3Q8N7X2 389 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 OR1B1Q8NGR6 318 aa15.05■□□□□ -0
SHROOM3-209ENST00000490690 ZNF414Q96IQ9 312 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms