RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZNF90Q03938 601 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 GPHB5Q86YW7 130 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 OR11H1Q8NG94 326 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 PHYHIPLQ96FC7 376 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 PFDN2Q9UHV9 154 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 PXMP4Q9Y6I8 212 aa10.2□□□□□ -0.78
SNX12-205ENST00000490561 SETD2Q9BYW2 2564 aaPredicted RBP10.2□□□□□ -0.78
SNX12-205ENST00000490561 IGHV4OR15-8A0A075B7B6 117 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 A0A087WW49 117 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 A0A1W2PRX2 142 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 TRBV12-3P01733 135 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 SEC11BP0C7V7 166 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 LINC00869P0C866 280 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PSG1P11464 419 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 MYCNOSP40205 109 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PLP1P60201 277 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PRR20EP86478 221 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PRR20CP86479 221 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PRR20DP86480 221 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PRR20BP86481 221 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PRR20AP86496 221 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 NSUN5P1Q3KNT7 163 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 OR4F17Q8NGA8 305 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 OR1L4Q8NGR5 311 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 OR4F4Q96R69 305 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PFDN5Q99471 154 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 SLC39A9Q9NUM3 307 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 RNF24Q9Y225 148 aa10.19□□□□□ -0.78
SNX12-205ENST00000490561 PUS1Q9Y606 427 aaKnown RBP eCLIP10.19□□□□□ -0.78
SNX12-205ENST00000490561 ELOA3CA0A087WX78 387 aaPredicted RBP10.18□□□□□ -0.78
SNX12-205ENST00000490561 WI2-2373I1.2A0A1W2PRP0 233 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 CCL24O00175 119 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 LGALS9O00182 355 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 SPP1P10451 314 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 HOXD3P31249 432 aaPredicted RBP10.18□□□□□ -0.78
SNX12-205ENST00000490561 ELLP55199 621 aaPredicted RBP10.18□□□□□ -0.78
SNX12-205ENST00000490561 FHL3Q13643 280 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
SNX12-205ENST00000490561 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 REC114Q7Z4M0 266 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 C1QL4Q86Z23 238 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 TMEM190Q8WZ59 177 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 RNF125Q96EQ8 232 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 RNF2Q99496 336 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 RSG1Q9BU20 258 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 SLC25A32Q9H2D1 315 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 UFC1Q9Y3C8 167 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
SNX12-205ENST00000490561 NF1P21359 2839 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 UMAD1C9J7I0 102 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 HYPMO75409 117 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 YIF1AO95070 293 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 IL4P05112 153 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 BMI1P35226 326 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 LYZP61626 148 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 FFAR4Q5NUL3 377 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 AKR1C8PQ5T2L2 129 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 TOMM20LQ6UXN7 152 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 GATAD1Q8WUU5 269 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 NARS2Q96I59 477 aaKnown RBP10.17□□□□□ -0.78
SNX12-205ENST00000490561 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 METTL26Q96S19 204 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
SNX12-205ENST00000490561 K7EMT4 169 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 M6PRP20645 277 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 RAB5CP51148 216 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 KLF5Q13887 457 aaPredicted RBP10.16□□□□□ -0.78
SNX12-205ENST00000490561 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 DPPA3Q6W0C5 159 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 ZFAND3Q9H8U3 227 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 DNAJC4Q9NNZ3 241 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 RABAC1Q9UI14 185 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 HIGD1AQ9Y241 93 aa10.16□□□□□ -0.78
SNX12-205ENST00000490561 A8MWP6 167 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 M0QZ24 198 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 PF4P02776 101 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 ORM2P19652 201 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 GATA2P23769 480 aaPredicted RBP10.15□□□□□ -0.78
SNX12-205ENST00000490561 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 TMEM182Q6ZP80 229 aaPredicted RBP10.15□□□□□ -0.78
SNX12-205ENST00000490561 OR1B1Q8NGR6 318 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 MARC2Q969Z3 335 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 C20orf24Q9BUV8 137 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 PBDC1Q9BVG4 233 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.78
SNX12-205ENST00000490561 SH3BGRL3Q9H299 93 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 TMEM231Q9H6L2 316 aa10.15□□□□□ -0.78
SNX12-205ENST00000490561 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
SNX12-205ENST00000490561 IGHV3-35A0A0C4DH35 117 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 A0A1W2PS18 150 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 ZNF320A2RRD8 509 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms