RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NPIPB3Q92617 1050 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
PCCB-218ENST00000490504 DMRT1Q9Y5R6 373 aa12.23□□□□□ -0.45
PCCB-218ENST00000490504 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 NPIPB5A8MRT5 1133 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 ADARB2-AS1A8MUL3 147 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
PCCB-218ENST00000490504 EIF3GO75821 320 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCCB-218ENST00000490504 BCL2P10415 239 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 DEFA4P12838 97 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 RND2P52198 227 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 DEFA5Q01523 94 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 ICAM4Q14773 271 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 KHDC3LQ587J8 217 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 IGHV7-81A0A0B4J1V7 117 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 TCRBV4S1A1TA0A5B7 111 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 MT-CO2P00403 227 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 RHOBP62745 196 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
PCCB-218ENST00000490504 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
PCCB-218ENST00000490504 ZFP92A6NM28 416 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 IGHV3-48P01763 117 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 HSPB1P04792 205 aaKnown RBP12.21□□□□□ -0.46
PCCB-218ENST00000490504 SELENOTP62341 195 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 NDUFA11Q86Y39 141 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 SVBPQ8N300 66 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 TMEM116Q8NCL8 245 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 MOB4Q9Y3A3 225 aa12.21□□□□□ -0.46
PCCB-218ENST00000490504 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 I3L2K1 104 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 TAGLN2P37802 199 aaKnown RBP12.2□□□□□ -0.46
PCCB-218ENST00000490504 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 C5orf56Q8N8D9 126 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 RXFP4Q8TDU9 374 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 MANBALQ9NQG1 85 aa12.2□□□□□ -0.46
PCCB-218ENST00000490504 G3V4G9 280 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 M0QZK8 103 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 SCO1O75880 301 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 SRP19P09132 144 aaKnown RBP12.19□□□□□ -0.46
PCCB-218ENST00000490504 STAG3L2P0CL84 134 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 STAG3L3P0CL85 134 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
PCCB-218ENST00000490504 GATA2P23769 480 aaPredicted RBP12.19□□□□□ -0.46
PCCB-218ENST00000490504 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 TCTEX1D4Q5JR98 221 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 C10orf99Q6UWK7 81 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 SLC35E3Q7Z769 313 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 TRGV9Q99603 122 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 HSPB9Q9BQS6 159 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 TMPRSS5Q9H3S3 457 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 CXorf1O96002 111 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 PSMB3P49720 205 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 IQCF2Q8IXL9 164 aa12.19□□□□□ -0.46
PCCB-218ENST00000490504 IGLV11-55A0A075B6I3 123 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 A0A1W2PRX2 142 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 K7EIM0 57 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 OR5G3P0C626 314 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 ZNF90Q03938 601 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 RNF2Q99496 336 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 SEPSECSQ9HD40 501 aaKnown RBP12.18□□□□□ -0.46
PCCB-218ENST00000490504 FUT9Q9Y231 359 aa12.18□□□□□ -0.46
PCCB-218ENST00000490504 SNAPINO95295 136 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 SOHLH1Q5JUK2 328 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 GATAD1Q8WUU5 269 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 PFDN5Q99471 154 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 MRPL32Q9BYC8 188 aaKnown RBP12.17□□□□□ -0.46
PCCB-218ENST00000490504 NKX6-2Q9C056 277 aaPredicted RBP12.17□□□□□ -0.46
PCCB-218ENST00000490504 DNAH3Q8TD57 4116 aa12.17□□□□□ -0.46
PCCB-218ENST00000490504 PSMB11A5LHX3 300 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 NDUFS6O75380 124 aaKnown RBP12.16□□□□□ -0.46
PCCB-218ENST00000490504 SAMD5Q5TGI4 173 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 CYB561D1Q8N8Q1 229 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 FANCD2OSQ96PS1 177 aa12.16□□□□□ -0.46
PCCB-218ENST00000490504 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
PCCB-218ENST00000490504 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 MIR17HGQ75NE6 70 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 DNAJC4Q9NNZ3 241 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
PCCB-218ENST00000490504 THYN1Q9P016 225 aa12.15□□□□□ -0.46
PCCB-218ENST00000490504 CLN5O75503 358 aa12.15□□□□□ -0.47
PCCB-218ENST00000490504 IGLC1P0CG04 106 aa12.15□□□□□ -0.47
PCCB-218ENST00000490504 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.47
PCCB-218ENST00000490504 TAS2R45P59539 299 aa12.15□□□□□ -0.47
PCCB-218ENST00000490504 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms