RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 OR5C1Q8NGR4 320 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 TMEM147Q9BVK8 224 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 UQCC1Q9NVA1 299 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 MLXQ9UH92 298 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 HSPB11Q9Y547 144 aa12.68□□□□□ -0.38
SFXN5-220ENST00000490056 FXYD6-FXYD2A0A087WZ82 144 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 IGLV1-51P01701 117 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 APOHP02749 345 aaPredicted RBP12.67□□□□□ -0.38
SFXN5-220ENST00000490056 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 BAXQ07812 192 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 ATP6V1FQ16864 119 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 BEAN1Q3B7T3 259 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 TEPPQ6URK8 271 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 CYP2G1PQ6ZSU1 146 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 OR51G1Q8NGK1 321 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 GINS3Q9BRX5 216 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 MRPL27Q9P0M9 148 aaKnown RBP12.67□□□□□ -0.38
SFXN5-220ENST00000490056 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
SFXN5-220ENST00000490056 UBE2L5PA0A1B0GUS4 154 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 FABP1P07148 127 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 USF2Q15853 346 aaPredicted RBP12.66□□□□□ -0.38
SFXN5-220ENST00000490056 DEFB114Q30KQ6 69 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 BTNL8Q6UX41 500 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 MARC2Q969Z3 335 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 MGST2Q99735 147 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 PBDC1Q9BVG4 233 aa12.66□□□□□ -0.38
SFXN5-220ENST00000490056 LSM4Q9Y4Z0 139 aaKnown RBP12.66□□□□□ -0.38
SFXN5-220ENST00000490056 IGHV3-66A0A0C4DH42 116 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 IZUMO1RA6ND01 250 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
SFXN5-220ENST00000490056 NPPCP23582 126 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 LYZP61626 148 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 ZNF546Q86UE3 836 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 ST6GAL2Q96JF0 529 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 RHPN1-AS1Q9BWJ2 59 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
SFXN5-220ENST00000490056 CHEK1O14757 476 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 AGPAT2O15120 278 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 FGF7P21781 194 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 CRYBB3P26998 211 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-220ENST00000490056 KPRPQ5T749 579 aaPredicted RBP12.64□□□□□ -0.39
SFXN5-220ENST00000490056 BPIFCQ8NFQ6 507 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 ST8SIA2Q92186 375 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 METTL26Q96S19 204 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 SLC45A2Q9UMX9 530 aa12.64□□□□□ -0.39
SFXN5-220ENST00000490056 HNRNPCP07910 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
SFXN5-220ENST00000490056 NUP62P37198 522 aaPredicted RBP12.63□□□□□ -0.39
SFXN5-220ENST00000490056 CAMLGP49069 296 aa12.63□□□□□ -0.39
SFXN5-220ENST00000490056 ATP5SQ99766 215 aa12.63□□□□□ -0.39
SFXN5-220ENST00000490056 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
SFXN5-220ENST00000490056 RABAC1Q9UI14 185 aa12.63□□□□□ -0.39
SFXN5-220ENST00000490056 TNFSF18Q9UNG2 199 aa12.63□□□□□ -0.39
SFXN5-220ENST00000490056 RNF222A6NCQ9 220 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 ORM2P19652 201 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
SFXN5-220ENST00000490056 SELENOTP62341 195 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 MIC13Q5XKP0 118 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 STPG3Q8N7X2 389 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 INO80EQ8NBZ0 244 aaPredicted RBP12.62□□□□□ -0.39
SFXN5-220ENST00000490056 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 RNF2Q99496 336 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 GGTLC1Q9BX51 225 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 DOK5Q9P104 306 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 FBXL17Q9UF56 701 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 U3KQE9 123 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 SORL1Q92673 2214 aa12.62□□□□□ -0.39
SFXN5-220ENST00000490056 LINC00869P0C866 280 aa12.61□□□□□ -0.39
SFXN5-220ENST00000490056 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
SFXN5-220ENST00000490056 RAB31Q13636 194 aa12.61□□□□□ -0.39
SFXN5-220ENST00000490056 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
SFXN5-220ENST00000490056 OR1B1Q8NGR6 318 aa12.61□□□□□ -0.39
SFXN5-220ENST00000490056 PRR25Q96S07 402 aa12.61□□□□□ -0.39
SFXN5-220ENST00000490056 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 ARPC5O15511 151 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 CFDP00746 253 aaPredicted RBP12.6□□□□□ -0.39
SFXN5-220ENST00000490056 OPCMLQ14982 345 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 LCN12Q6JVE5 192 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 NARS2Q96I59 477 aaKnown RBP12.6□□□□□ -0.39
SFXN5-220ENST00000490056 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
SFXN5-220ENST00000490056 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
SFXN5-220ENST00000490056 ZNF256Q9Y2P7 627 aaPredicted RBP12.6□□□□□ -0.39
SFXN5-220ENST00000490056 IGKV3-7A0A075B6H7 116 aa12.59□□□□□ -0.39
SFXN5-220ENST00000490056 A0A1W2PS18 150 aa12.59□□□□□ -0.39
SFXN5-220ENST00000490056 DFFBO76075 338 aa12.59□□□□□ -0.39
SFXN5-220ENST00000490056 GP9P14770 177 aa12.59□□□□□ -0.39
SFXN5-220ENST00000490056 CD300CQ08708 224 aa12.59□□□□□ -0.39
SFXN5-220ENST00000490056 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms