RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 MPTX1A8MV57 137 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
SRSF4-204ENST00000489898 PSG1P11464 419 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 AKR1C4P17516 323 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 CCR6P51684 374 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 SUB1P53999 127 aaKnown RBP eCLIP8.56□□□□□ -1.04
SRSF4-204ENST00000489898 DEFB1P60022 68 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 ZNF90Q03938 601 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 GAMTQ14353 236 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 OXA1LQ15070 435 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 BAK1Q16611 211 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 RNASE11Q8TAA1 199 aaKnown RBP8.56□□□□□ -1.04
SRSF4-204ENST00000489898 METTL26Q96S19 204 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 C7orf50Q9BRJ6 194 aaKnown RBP8.56□□□□□ -1.04
SRSF4-204ENST00000489898 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 SCP2D1Q9UJQ7 156 aa8.56□□□□□ -1.04
SRSF4-204ENST00000489898 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 DUXBA0A1W2PPF3 345 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 LYRM1O43325 122 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 JTBO76095 146 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 IL4P05112 153 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 CD5P06127 495 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 HNRNPCP07910 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
SRSF4-204ENST00000489898 NPPCP23582 126 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 NANOS2P60321 138 aaKnown RBP8.55□□□□□ -1.04
SRSF4-204ENST00000489898 IFITM3Q01628 133 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 GDF5OSQ5U4N7 250 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 OR11H2Q8NH07 326 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
SRSF4-204ENST00000489898 TRAV30A0A087WSZ9 112 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 ELOA3CA0A087WX78 387 aaPredicted RBP8.54□□□□□ -1.04
SRSF4-204ENST00000489898 RPS10-NUDT3A0A1W2PQS6 291 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 CXorf65A6NEN9 183 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PMS2P5A8MQ11 134 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 DEFB4AO15263 64 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 SLC25A6P12236 298 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PRR20EP86478 221 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PRR20CP86479 221 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PRR20DP86480 221 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PRR20BP86481 221 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PRR20AP86496 221 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 TMEM128Q5BJH2 165 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 Q6ZNX1 250 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
SRSF4-204ENST00000489898 LGI3Q8N145 548 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
SRSF4-204ENST00000489898 OR51G1Q8NGK1 321 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
SRSF4-204ENST00000489898 RNF125Q96EQ8 232 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 ENY2Q9NPA8 101 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 RABAC1Q9UI14 185 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
SRSF4-204ENST00000489898 IGHV4-28A0A0C4DH34 117 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 NAP1L6A6NFF2 107 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 A8MTW9 85 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 SFT2D2O95562 160 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 SRPXP78539 464 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 TMED4Q7Z7H5 227 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 DEDD2Q8WXF8 326 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 RARRES2Q99969 163 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 TBC1D24Q9ULP9 559 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 U3KQ87 197 aa8.53□□□□□ -1.04
SRSF4-204ENST00000489898 A0A1B0GVG6 124 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 A0A1W2PS18 150 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 ADAP1O75689 374 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 IAPPP10997 89 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 SIGLEC15Q6ZMC9 328 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 SCRT1Q9BWW7 348 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 TMEM231Q9H6L2 316 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 SEPSECSQ9HD40 501 aaKnown RBP8.52□□□□□ -1.05
SRSF4-204ENST00000489898 NRN1Q9NPD7 142 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 FLVCR2Q9UPI3 526 aa8.52□□□□□ -1.05
SRSF4-204ENST00000489898 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 HELTA6NFD8 242 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 H3BMM0 161 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 DEDDO75618 318 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 CCNKO75909 580 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 NDUFB6O95139 128 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 SPP1P10451 314 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 HLA-DRB4P13762 266 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 GPX4P36969 197 aaPredicted RBP8.51□□□□□ -1.05
SRSF4-204ENST00000489898 PAX9P55771 341 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
SRSF4-204ENST00000489898 PAFAH1B2P68402 229 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 PSMG4Q5JS54 123 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 ACTL10Q5JWF8 245 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 GGNBP1Q5YKI7 109 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 OR8G2PQ6IF36 304 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 ZNF705AQ6ZN79 300 aaPredicted RBP8.51□□□□□ -1.05
SRSF4-204ENST00000489898 NRARPQ7Z6K4 114 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 OR4D5Q8NGN0 318 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 C20orf173Q96LM9 149 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 RAB40CQ96S21 281 aa8.51□□□□□ -1.05
SRSF4-204ENST00000489898 SLC25A21Q9BQT8 299 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms