RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 VPS13CQ709C8 3753 aa12.58□□□□□ -0.4
BRD9-208ENST00000489816 A0A1W2PRE2 83 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 CNIH1O95406 144 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 ZNF835Q9Y2P0 537 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 CCL21O00585 134 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 ZNF841Q6ZN19 808 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 PEX7O00628 323 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 CX3CL1P78423 397 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 SLAQ13239 276 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
BRD9-208ENST00000489816 IGF2BP2-AS1Q96M15 143 aa12.57□□□□□ -0.4
BRD9-208ENST00000489816 AMTP48728 403 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 SIGLEC9Q9Y336 463 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 FBLN7Q53RD9 439 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 NUDT10Q8NFP7 164 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 NUDT11Q96G61 164 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 TMEM68Q96MH6 324 aa12.56□□□□□ -0.4
BRD9-208ENST00000489816 MC5RP33032 325 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 BPIFB3P59826 476 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 UBE2G1P62253 170 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 HES1Q14469 280 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 ATOH7Q8N100 152 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.44e-7■■■□□ 18.7
BRD9-208ENST00000489816 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 LINC00322Q6ZN03 302 aaPredicted RBP12.55□□□□□ -0.4
BRD9-208ENST00000489816 EXOC3-AS1Q8N2X6 119 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 TPPP2P59282 170 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 RBPJQ06330 500 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 MMDQ15546 238 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 BATFQ16520 125 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
BRD9-208ENST00000489816 OSTCQ9NRP0 149 aa12.55□□□□□ -0.4
BRD9-208ENST00000489816 IGHV3OR16-8A0A075B7F1 116 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 BMPR1BO00238 502 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 TIMM23O14925 209 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 NBL1P41271 181 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 TMEM30BQ3MIR4 351 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 SIGLECL1Q8N7X8 197 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 OR2D3Q8NGH3 330 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 RAXQ9Y2V3 346 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 A6NNC1 897 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 K7ENP7 123 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 PSG1P11464 419 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 SRSF12Q8WXF0 261 aaKnown RBP12.54□□□□□ -0.4
BRD9-208ENST00000489816 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
BRD9-208ENST00000489816 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
BRD9-208ENST00000489816 ZNF331Q9NQX6 463 aaPredicted RBP12.54□□□□□ -0.4
BRD9-208ENST00000489816 TBL2Q9Y4P3 447 aaKnown RBP12.54□□□□□ -0.4
BRD9-208ENST00000489816 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 B9A039 149 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 M0QZ24 198 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 ZNF600Q6ZNG1 722 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 LURAP1LQ8IV03 231 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 C19orf24Q9BVV8 132 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 IGHV3-35A0A0C4DH35 117 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 VWC2LB2RUY7 222 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 IGLV1-47P01700 117 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 IGHV3-23P01764 117 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 LGALS7P47929 136 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 ZNF137PP52743 207 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 PRRX1P54821 245 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 BCL6BQ8N143 479 aaPredicted RBP12.53□□□□□ -0.4
BRD9-208ENST00000489816 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
BRD9-208ENST00000489816 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 HYPMO75409 117 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 FSTL3O95633 263 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
BRD9-208ENST00000489816 SELENOTP62341 195 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 LINC00311Q8N616 119 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 WNT10AQ9GZT5 417 aa12.53□□□□□ -0.4
BRD9-208ENST00000489816 NDUFS7O75251 213 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 NEU1Q99519 415 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 GNB1LQ9BYB4 327 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 KAAG1Q9UBP8 84 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 APCSP02743 223 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 LY96Q9Y6Y9 160 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 CENPEQ02224 2701 aa12.52□□□□□ -0.41
BRD9-208ENST00000489816 COMPP49747 757 aaPredicted RBP12.51□□□□□ -0.41
BRD9-208ENST00000489816 PERPQ96FX8 193 aa12.51□□□□□ -0.41
BRD9-208ENST00000489816 PMCHL1Q16048 86 aa12.51□□□□□ -0.41
BRD9-208ENST00000489816 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
BRD9-208ENST00000489816 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms