RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 FAM25CB3EWG5 89 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 FAM25GB3EWG6 89 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 CDS2O95674 445 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 OR5AC1P0C628 307 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 PSG1P11464 419 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 NCS1P62166 190 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 SCGB2B2Q4G0G5 96 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 ETFRF1Q6IPR1 90 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 GSG1LQ6UXU4 331 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 FAM219AQ8IW50 185 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 OR52I2Q8NH67 350 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 LHFPL5Q8TAF8 219 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 GPR146Q96CH1 333 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 WDR12Q9GZL7 423 aaKnown RBP12.04□□□□□ -0.48
TOP3B-217ENST00000489581 TMEM222Q9H0R3 208 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 SAV1Q9H4B6 383 aaPredicted RBP12.04□□□□□ -0.48
TOP3B-217ENST00000489581 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
TOP3B-217ENST00000489581 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
TOP3B-217ENST00000489581 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
TOP3B-217ENST00000489581 GLYATL2Q8WU03 294 aa12.03□□□□□ -0.48
TOP3B-217ENST00000489581 PBDC1Q9BVG4 233 aa12.03□□□□□ -0.48
TOP3B-217ENST00000489581 SLC35B3Q9H1N7 401 aa12.03□□□□□ -0.48
TOP3B-217ENST00000489581 B3GALNT1O75752 331 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 VBP1P61758 197 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 MEF2DQ14814 521 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
TOP3B-217ENST00000489581 C1orf158Q8N1D5 194 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 RBPMSQ93062 196 aaKnown RBP12.02□□□□□ -0.49
TOP3B-217ENST00000489581 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 C7orf50Q9BRJ6 194 aaKnown RBP12.02□□□□□ -0.49
TOP3B-217ENST00000489581 MTFP1Q9UDX5 166 aa12.02□□□□□ -0.49
TOP3B-217ENST00000489581 YTHDF2Q9Y5A9 579 aaKnown RBP12.02□□□□□ -0.49
TOP3B-217ENST00000489581 TEX13DA0A0J9YY54 714 aaPredicted RBP12.01□□□□□ -0.49
TOP3B-217ENST00000489581 LOC102723971A0A1B0GUV8 181 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 HBE1P02100 147 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 TBPP20226 339 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 ID1P41134 155 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 OXA1LQ15070 435 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 COQ8AQ8NI60 647 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
TOP3B-217ENST00000489581 C16orf90A8MZG2 172 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 F6UB75 175 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 TNFAIP8O95379 198 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 RAB3DO95716 219 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 RORCP51449 518 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 DAD1P61803 113 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 PSG9Q00887 426 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 TNP2Q05952 138 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 ZNF79Q15937 498 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 TMEM268Q5VZI3 342 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 NOXA1Q86UR1 476 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 CLUHP3Q96NS8 147 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 ABHD1Q96SE0 405 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 RTBDNQ9BSG5 229 aaPredicted RBP12□□□□□ -0.49
TOP3B-217ENST00000489581 NAA60Q9H7X0 242 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 VCX3AQ9NNX9 186 aa12□□□□□ -0.49
TOP3B-217ENST00000489581 C14orf166Q9Y224 244 aaKnown RBP12□□□□□ -0.49
TOP3B-217ENST00000489581 PSMB3P49720 205 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-217ENST00000489581 RRN3P1Q2M238 152 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 NMSQ5H8A3 153 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 FAAP20Q6NZ36 180 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 MZT2AQ6P582 158 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 TMEM229BQ8NBD8 167 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 FUNDC2Q9BWH2 189 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 EXTL2Q9UBQ6 330 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 PFDN2Q9UHV9 154 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 TMED3Q9Y3Q3 217 aa11.99□□□□□ -0.49
TOP3B-217ENST00000489581 LRP1BQ9NZR2 4599 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 A0A087WXM4 84 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 SOCS3O14543 225 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 NUP62P37198 522 aaPredicted RBP11.98□□□□□ -0.49
TOP3B-217ENST00000489581 TAS2R19P59542 299 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 ZNF90Q03938 601 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 STEAP1BQ6NZ63 245 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 EBLN2Q6P2I7 272 aa11.98□□□□□ -0.49
TOP3B-217ENST00000489581 ZFP92A6NM28 416 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 LYZP61626 148 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 SUPT4H1P63272 117 aaKnown RBP11.97□□□□□ -0.49
TOP3B-217ENST00000489581 SPATA31B1PQ5VZV4 182 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 C15orf53Q8NAA6 179 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 ATG101Q9BSB4 218 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 MAGT1Q9H0U3 335 aa11.97□□□□□ -0.49
TOP3B-217ENST00000489581 IGKV1D-37A0A075B6S9 117 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 A0A0J9YX75 114 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 CDK2AP2O75956 126 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 PRM2P04554 102 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 PAX9P55771 341 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 GPR107Q5VW38 600 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 PPP1R14BQ96C90 147 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 PRR13Q9NZ81 148 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 U3KQ87 197 aa11.96□□□□□ -0.49
TOP3B-217ENST00000489581 CRYM-AS1A6NIL9 109 aa11.95□□□□□ -0.5
TOP3B-217ENST00000489581 ISLRO14498 428 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms