RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
LINC00173-204ENST00000489452 OR51S1Q8NGJ8 323 aa9.62□□□□□ -0.87
LINC00173-204ENST00000489452 C1QTNF4Q9BXJ3 329 aa9.62□□□□□ -0.87
LINC00173-204ENST00000489452 TMEM56-RWDD3S4R434 201 aa9.62□□□□□ -0.87
LINC00173-204ENST00000489452 AKAIN1P0CW23 69 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 SMIM18P0DKX4 95 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 SSBP1Q04837 148 aaKnown RBP9.61□□□□□ -0.87
LINC00173-204ENST00000489452 KLF9Q13886 244 aaPredicted RBP9.61□□□□□ -0.87
LINC00173-204ENST00000489452 IL18Q14116 193 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 SPCS2Q15005 226 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 SURF2Q15527 256 aaPredicted RBP9.61□□□□□ -0.87
LINC00173-204ENST00000489452 GDF5OSQ5U4N7 250 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 NOXA1Q86UR1 476 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 CLVS1Q8IUQ0 354 aaPredicted RBP9.61□□□□□ -0.87
LINC00173-204ENST00000489452 DIRAS2Q96HU8 199 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 RBKSQ9H477 322 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
LINC00173-204ENST00000489452 PKHD1P08F94 4074 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 GSTZ1O43708 216 aaPredicted RBP9.6□□□□□ -0.87
LINC00173-204ENST00000489452 AKR1C4P17516 323 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 MRPS10P82664 201 aaKnown RBP9.6□□□□□ -0.87
LINC00173-204ENST00000489452 ZNF90Q03938 601 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 NMSQ5H8A3 153 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 LGI3Q8N145 548 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 DTD1Q8TEA8 209 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 SMIM4Q8WVI0 70 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 RNF125Q96EQ8 232 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 PRRT1Q99946 306 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 NDUFAF3Q9BU61 184 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
LINC00173-204ENST00000489452 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
LINC00173-204ENST00000489452 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 OR2F1Q13607 317 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 OR4B1Q8NGF8 309 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 SEPSECSQ9HD40 501 aaKnown RBP9.59□□□□□ -0.87
LINC00173-204ENST00000489452 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 U3KQ87 197 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 PCLOQ9Y6V0 5065 aa9.59□□□□□ -0.87
LINC00173-204ENST00000489452 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 P0DMU3 169 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 ID1P41134 155 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 NKX2-1P43699 371 aaPredicted RBP9.58□□□□□ -0.88
LINC00173-204ENST00000489452 CCR6P51684 374 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 LYZP61626 148 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 GAMTQ14353 236 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 LINC00336Q6ZUF6 198 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 GPR141Q7Z602 305 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 OR1S1Q8NH92 325 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 IL22RA2Q969J5 263 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 PPP1R14BQ96C90 147 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 HSPB7Q9UBY9 170 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 PFDN2Q9UHV9 154 aa9.58□□□□□ -0.88
LINC00173-204ENST00000489452 PAIP2BQ9ULR5 123 aaKnown RBP9.58□□□□□ -0.88
LINC00173-204ENST00000489452 AMBPP02760 352 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 HTN3P15516 51 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
LINC00173-204ENST00000489452 COQ8AQ8NI60 647 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 SLC35E1Q96K37 410 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 SCGB3A2Q96PL1 93 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 CACFD1Q9UGQ2 172 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 SCP2D1Q9UJQ7 156 aa9.57□□□□□ -0.88
LINC00173-204ENST00000489452 PKD1P98161 4303 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 IGKV1D-37A0A075B6S9 117 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 A0A0B4J2A0 478 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 ANKRD20A5PA0PJZ0 165 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 F6UB75 175 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 CTDSPLO15194 276 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 GPX4P36969 197 aaPredicted RBP9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SUPT4H1P63272 117 aaKnown RBP9.56□□□□□ -0.88
LINC00173-204ENST00000489452 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SLC35B3Q9H1N7 401 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SHPKQ9UHJ6 478 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 RFNGQ9Y644 331 aa9.56□□□□□ -0.88
LINC00173-204ENST00000489452 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 PRSS29PA6NIE9 313 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 ZNF705FA8MVS1 300 aaPredicted RBP9.55□□□□□ -0.88
LINC00173-204ENST00000489452 IFNA21P01568 189 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
LINC00173-204ENST00000489452 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
LINC00173-204ENST00000489452 IAPPP10997 89 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
LINC00173-204ENST00000489452 ALDH3B2P48448 385 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 FAM222AQ5U5X8 452 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 FAM78BQ5VT40 261 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 OR8G2PQ6IF36 304 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 EBLN2Q6P2I7 272 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 FOXI2Q6ZQN5 318 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 UBE2DNLQ8IWF7 75 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 NEU1Q99519 415 aa9.55□□□□□ -0.88
LINC00173-204ENST00000489452 C7orf50Q9BRJ6 194 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms