RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PSENENQ9NZ42 101 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 RABAC1Q9UI14 185 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
CCL28-202ENST00000489442 PSG1P11464 419 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 P2RY1P47900 373 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 C12orf45Q8N5I9 185 aaPredicted RBP9.97□□□□□ -0.81
CCL28-202ENST00000489442 ZBTB8BQ8NAP8 495 aaPredicted RBP9.97□□□□□ -0.81
CCL28-202ENST00000489442 OR51G1Q8NGK1 321 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 MS4A6AQ9H2W1 248 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 PFDN2Q9UHV9 154 aa9.97□□□□□ -0.81
CCL28-202ENST00000489442 C5orf51A6NDU8 294 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 CCSO14618 274 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 OR8G2PQ6IF36 304 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 STXBP6Q8NFX7 210 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 SMIM8Q96KF7 97 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 FAM110AQ9BQ89 295 aa9.96□□□□□ -0.82
CCL28-202ENST00000489442 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 HELTA6NFD8 242 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 SNRPGP15A8MWD9 76 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 AP2S1P53680 142 aaPredicted RBP9.95□□□□□ -0.82
CCL28-202ENST00000489442 APOC4P55056 127 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 ZNF90Q03938 601 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 AKR1C1Q04828 323 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 OR2F1Q13607 317 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 USF2Q15853 346 aaPredicted RBP9.95□□□□□ -0.82
CCL28-202ENST00000489442 APRG1Q8IVJ8 170 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 RNF125Q96EQ8 232 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 CITED4Q96RK1 184 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 RAB40CQ96S21 281 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 RETNQ9HD89 108 aa9.95□□□□□ -0.82
CCL28-202ENST00000489442 L7N2F9 121 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 RPL35AP18077 110 aaKnown RBP9.94□□□□□ -0.82
CCL28-202ENST00000489442 DEFA1P59665 94 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 DEFA3P59666 94 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 LYZP61626 148 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 VAMP2P63027 116 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 PPP1R14BQ96C90 147 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 TRGV9Q99603 122 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
CCL28-202ENST00000489442 GPN1Q9HCN4 374 aaPredicted RBP9.94□□□□□ -0.82
CCL28-202ENST00000489442 IGKV1D-37A0A075B6S9 117 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 TRAV2A0A0B4J234 112 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 MBPP02686 304 aaPredicted RBP9.93□□□□□ -0.82
CCL28-202ENST00000489442 METTL15P1P0C7V9 234 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 NUP62P37198 522 aaPredicted RBP9.93□□□□□ -0.82
CCL28-202ENST00000489442 TAS2R30P59541 319 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 GSG1LQ6UXU4 331 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 ACOT7LQ6ZUV0 252 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 STPG3Q8N7X2 389 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 THAP8Q8NA92 274 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 LSM5Q9Y4Y9 91 aaKnown RBP9.93□□□□□ -0.82
CCL28-202ENST00000489442 U3KQE9 123 aa9.93□□□□□ -0.82
CCL28-202ENST00000489442 AGRNO00468 2067 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 PRSS46E5RG02 174 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 TSC22D2O75157 780 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
CCL28-202ENST00000489442 IL5P05113 134 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 DEFB131AP59861 70 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 IFITM3Q01628 133 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 ZNF124Q15973 351 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 BPIFCQ8NFQ6 507 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 OR10P1Q8NGE3 313 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 C2orf50Q96LR7 162 aa9.92□□□□□ -0.82
CCL28-202ENST00000489442 RCL1Q9Y2P8 373 aaKnown RBP9.92□□□□□ -0.82
CCL28-202ENST00000489442 DNAH7Q8WXX0 4024 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 IGKV1OR2-108A0A075B7D4 117 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 KIR2DL5BA0A0G2JN68 375 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 KIR2DL5BA0A0G2JPC4 375 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 C7orf66A4D0T2 115 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 UBE2CO00762 179 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 BUB3O43684 328 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 PVALBP20472 110 aaPredicted RBP9.91□□□□□ -0.82
CCL28-202ENST00000489442 BCAP31P51572 246 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 PAX9P55771 341 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 RRAS2P62070 204 aaPredicted RBP9.91□□□□□ -0.82
CCL28-202ENST00000489442 LEMD1Q68G75 181 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 SIGLEC15Q6ZMC9 328 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 TMEM144Q7Z5S9 345 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 NRARPQ7Z6K4 114 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 KIR2DL5AQ8N109 375 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 KIR2DL5BQ8NHK3 375 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 GLMPQ8WWB7 406 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 MGAT4CQ9UBM8 478 aa9.91□□□□□ -0.82
CCL28-202ENST00000489442 INMT-MINDY4F8WBC2 141 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 C3orf84H3BNL1 204 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 K7EQG2 157 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 S100A7P31151 101 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 S100A10P60903 97 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 DLK1P80370 383 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 FAM24BQ8N5W8 94 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 FBXL17Q9UF56 701 aa9.9□□□□□ -0.82
CCL28-202ENST00000489442 K7EPK0 472 aa9.89□□□□□ -0.83
CCL28-202ENST00000489442 PRAF2O60831 178 aa9.89□□□□□ -0.83
CCL28-202ENST00000489442 CCNKO75909 580 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms