RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 C22orf46C9J442 243 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 LYNX1G3V0Z9 82 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 NBR2O15453 112 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 OR7C2O60412 319 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 MOSP00540 346 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 IGHV4-39P01824 125 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 LYNX1P0DP58 116 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 CDX1P47902 265 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-207ENST00000489357 MEOX2P50222 304 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 AKR1D1P51857 326 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 TAS2R60P59551 318 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 UBE2G2P60604 165 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 EBI3Q14213 229 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 COA6Q5JTJ3 125 aaKnown RBP6.74□□□□□ -1.33
VTI1A-207ENST00000489357 DNLZQ5SXM8 178 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF343Q6P1L6 599 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 MIR17HGQ75NE6 70 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 OR4X1Q8NH49 305 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 SRSF12Q8WXF0 261 aaKnown RBP6.74□□□□□ -1.33
VTI1A-207ENST00000489357 CFHR4Q92496 578 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 NPIPB3Q92617 1050 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 FNDC4Q9H6D8 234 aaPredicted RBP6.74□□□□□ -1.33
VTI1A-207ENST00000489357 PITPNC1Q9UKF7 332 aa6.74□□□□□ -1.33
VTI1A-207ENST00000489357 YTHDF2Q9Y5A9 579 aaKnown RBP6.74□□□□□ -1.33
VTI1A-207ENST00000489357 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.73□□□□□ -1.332e-6■□□□□ 8.2
VTI1A-207ENST00000489357 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HELTA6NFD8 242 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TEX22C9J3V5 150 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 E7EUB6 86 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 PHOX2AO14813 284 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BKO60814 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 NDUFS7O75251 213 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 SCGB2A1O75556 95 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 DEFA4P12838 97 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 CDKN1AP38936 164 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 GNG4P50150 75 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TIGITQ495A1 244 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TEX38Q6PEX7 206 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 WFDC11Q8NEX6 87 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 OR10G8Q8NGN5 311 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 RBM14Q96PK6 669 aaKnown RBP6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 CHRDL1Q9BU40 450 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TNFRSF19Q9NS68 423 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 CDC42EP3Q9UKI2 254 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 MALRD1Q5VYJ5 2156 aa6.73□□□□□ -1.33
VTI1A-207ENST00000489357 TRBV20OR9-2A0A075B6H5 130 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 A0A096LNT2 108 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 TRBV9A0A0B4J1U6 114 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 NPIPB5A8MRT5 1133 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 ISLRO14498 428 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 TIMM23O14925 209 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 EIF3GO75821 320 aaKnown RBP eCLIP6.72□□□□□ -1.33
VTI1A-207ENST00000489357 TRGC2P03986 189 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 COX7A1P24310 79 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 S100A2P29034 98 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 S100A7P31151 101 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 RPL35P42766 123 aaKnown RBP6.72□□□□□ -1.33
VTI1A-207ENST00000489357 DSCR9P59020 149 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 UBE2L3P68036 154 aaKnown RBP6.72□□□□□ -1.33
VTI1A-207ENST00000489357 PLGLAQ15195 96 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 MMDQ15546 238 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 C10orf55Q5SWW7 151 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 SPATA31B1PQ5VZV4 182 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF562Q6V9R5 426 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 OR2T6Q8NHC8 308 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 C12orf57Q99622 126 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 PAXXQ9BUH6 204 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 OR51M1Q9H341 326 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 LPAR2Q9HBW0 351 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 ZNF355PQ9NSJ1 428 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 GAR1Q9NY12 217 aaKnown RBP6.72□□□□□ -1.33
VTI1A-207ENST00000489357 C1RLQ9NZP8 487 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 THYN1Q9P016 225 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 TMEM14CQ9P0S9 112 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 ABCA2Q9BZC7 2435 aa6.72□□□□□ -1.33
VTI1A-207ENST00000489357 HIVEP2P31629 2446 aa6.71□□□□□ -1.33
VTI1A-207ENST00000489357 IGHV2-70DA0A0C4DH43 119 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 VWC2LB2RUY7 222 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 NDUFS8O00217 210 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 HYPMO75409 117 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 FOXH1O75593 365 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 UBE2E1P51965 193 aa6.71□□□□□ -1.34
VTI1A-207ENST00000489357 ATP5J2P56134 94 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms