RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 EBLN2Q6P2I7 272 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 RNF141Q8WVD5 230 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 TP53RKQ96S44 253 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 SOCS3O14543 225 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 PSG1P11464 419 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 PI3P19957 117 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 HTR2BP41595 481 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 PAX9P55771 341 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 TMEM69Q5SWH9 247 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 SPARTQ8N0X7 666 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 IGF2BP2-AS1Q96M15 143 aa11.25□□□□□ -0.61
USP48-210ENST00000489108 A0A0J9YX75 114 aa11.24□□□□□ -0.61
USP48-210ENST00000489108 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
USP48-210ENST00000489108 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.61
USP48-210ENST00000489108 TTC32Q5I0X7 151 aa11.24□□□□□ -0.61
USP48-210ENST00000489108 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
USP48-210ENST00000489108 ACY3Q96HD9 319 aa11.24□□□□□ -0.61
USP48-210ENST00000489108 UHRF2Q96PU4 802 aa11.24□□□□□ -0.61
USP48-210ENST00000489108 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
USP48-210ENST00000489108 ATG12O94817 140 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 ATP5G1P05496 136 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 PGAM2P15259 253 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 ATP5G3P48201 142 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 SPCS3P61009 180 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 RND3P61587 244 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 SP6Q3SY56 376 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 C2orf83Q53S99 150 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 FRZBQ92765 325 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 PBDC1Q9BVG4 233 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 Q9H3A6 140 aa11.23□□□□□ -0.61
USP48-210ENST00000489108 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
USP48-210ENST00000489108 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 CBY3A6NI87 242 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 ELK1P19419 428 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 AZU1P20160 251 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 PIGPP57054 158 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 TRIM16LQ309B1 348 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 UBE2NLQ5JXB2 153 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 AMTNQ6UX39 209 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 GPX8Q8TED1 209 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
USP48-210ENST00000489108 C20orf173Q96LM9 149 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 ABHD1Q96SE0 405 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 VPS13BQ7Z7G8 4022 aa11.22□□□□□ -0.61
USP48-210ENST00000489108 PLAC8L1A1L4L8 177 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 ISLRO14498 428 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 GABARAPL2P60520 117 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 SAMD12Q8N8I0 201 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 OR4C16Q8NGL9 310 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 RNASE11Q8TAA1 199 aaKnown RBP11.21□□□□□ -0.61
USP48-210ENST00000489108 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 RPRMQ9NS64 109 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 DOK5Q9P104 306 aa11.21□□□□□ -0.61
USP48-210ENST00000489108 A8MTW9 85 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 M0R2Z0 102 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
USP48-210ENST00000489108 TMEM127O75204 238 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 NUP62P37198 522 aaPredicted RBP11.2□□□□□ -0.62
USP48-210ENST00000489108 SLC24A4Q8NFF2 622 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 OR52E5Q8NH55 327 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 FCGR1BQ92637 280 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
USP48-210ENST00000489108 ZNF586Q9NXT0 402 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 PFDN2Q9UHV9 154 aa11.2□□□□□ -0.62
USP48-210ENST00000489108 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 TSPOP30536 169 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 RCVRNP35243 200 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 SUPT4H1P63272 117 aaKnown RBP11.19□□□□□ -0.62
USP48-210ENST00000489108 SPINK13Q1W4C9 94 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 AARDQ4LEZ3 155 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
USP48-210ENST00000489108 ZNF486Q96H40 463 aaPredicted RBP11.19□□□□□ -0.62
USP48-210ENST00000489108 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 SMR3BP02814 79 aaPredicted RBP11.18□□□□□ -0.62
USP48-210ENST00000489108 ZNF90Q03938 601 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 ESRGQ1W209 222 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 OR11H7Q8NGC8 314 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 PTTG2Q9NZH5 202 aa11.18□□□□□ -0.62
USP48-210ENST00000489108 ANKRD65E5RJM6 399 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 INSP01308 110 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 UCP1P25874 307 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 TGFBR1P36897 503 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 B2MP61769 119 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 OR5I1Q13606 314 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 KLF9Q13886 244 aaPredicted RBP11.17□□□□□ -0.62
USP48-210ENST00000489108 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 OR8I2Q8N0Y5 310 aa11.17□□□□□ -0.62
USP48-210ENST00000489108 GNPNAT1Q96EK6 184 aaPredicted RBP11.17□□□□□ -0.62
USP48-210ENST00000489108 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms