RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 RNASEH2CQ8TDP1 164 aaKnown RBP11.41□□□□□ -0.58
ERGIC3-217ENST00000488935 RAB2BQ8WUD1 216 aa11.41□□□□□ -0.58
ERGIC3-217ENST00000488935 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
ERGIC3-217ENST00000488935 WDR12Q9GZL7 423 aaKnown RBP11.41□□□□□ -0.58
ERGIC3-217ENST00000488935 RBKSQ9H477 322 aa11.41□□□□□ -0.58
ERGIC3-217ENST00000488935 NOL3O60936 208 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 TOMM40O96008 361 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 AKAIN1P0CW23 69 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 EIF2B2P49770 351 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 OR2F1Q13607 317 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 IL18Q14116 193 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 TMEM41BQ5BJD5 291 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 CENPSQ8N2Z9 138 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 TMEM56-RWDD3S4R434 201 aa11.4□□□□□ -0.58
ERGIC3-217ENST00000488935 F6UB75 175 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 AKR1C4P17516 323 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 AP2S1P53680 142 aaPredicted RBP11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 SNRPD3P62318 126 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 NMSQ5H8A3 153 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 SMIM4Q8WVI0 70 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 DIRAS2Q96HU8 199 aa11.39□□□□□ -0.59
ERGIC3-217ENST00000488935 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 B3GALNT1O75752 331 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 LGI3Q8N145 548 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 DTD1Q8TEA8 209 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 RNF126Q9BV68 326 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 MCUBQ9NWR8 336 aa11.38□□□□□ -0.59
ERGIC3-217ENST00000488935 IGLV2-18A0A075B6J9 118 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 IAPPP10997 89 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 HLA-DRB4P13762 266 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 LYZP61626 148 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 SUPT4H1P63272 117 aaKnown RBP11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 KLF9Q13886 244 aaPredicted RBP11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 GAMTQ14353 236 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 C15orf40Q8WUR7 153 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 PAIP2BQ9ULR5 123 aaKnown RBP11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 HLA-DRB4X5D2U9 266 aa11.37□□□□□ -0.59
ERGIC3-217ENST00000488935 PKD1P98161 4303 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 A0A1B0GVY2 172 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 CCDC160A6NGH7 325 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 ZFP92A6NM28 416 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 H3BMQ9 156 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 PRM2P04554 102 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 HTN3P15516 51 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 SURF2Q15527 256 aaPredicted RBP11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 NDUFA13Q9P0J0 144 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
ERGIC3-217ENST00000488935 ANKRD20A5PA0PJZ0 165 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 ZNF701M0R085 212 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 RTL8CO15255 209 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 NUTF2P61970 127 aaKnown RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 PRRT1Q99946 306 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 NDUFAF3Q9BU61 184 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 KCNIP3Q9Y2W7 256 aa11.35□□□□□ -0.59
ERGIC3-217ENST00000488935 GSTZ1O43708 216 aaPredicted RBP11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 AMBPP02760 352 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 CCR6P51684 374 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 MRPS10P82664 201 aaKnown RBP11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 ZNF709Q8N972 641 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 PPP1R14BQ96C90 147 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 SAV1Q9H4B6 383 aaPredicted RBP11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 U3KQ87 197 aa11.34□□□□□ -0.59
ERGIC3-217ENST00000488935 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 ZNF705FA8MVS1 300 aaPredicted RBP11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 SOCS3O14543 225 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 CTDSPLO15194 276 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 ZNF705DP0CH99 300 aaPredicted RBP11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 ZNF705BP0CI00 300 aaPredicted RBP11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 GATA2P23769 480 aaPredicted RBP11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 FAM222AQ5U5X8 452 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 FAM78BQ5VT40 261 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 C1orf158Q8N1D5 194 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 DYNC2LI1Q8TCX1 351 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 MAGT1Q9H0U3 335 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 MUC4Q99102 2169 aa11.33□□□□□ -0.6
ERGIC3-217ENST00000488935 RYR1P21817 5038 aa11.32□□□□□ -0.6
ERGIC3-217ENST00000488935 IGKV1OR2-108A0A075B7D4 117 aa11.32□□□□□ -0.6
ERGIC3-217ENST00000488935 A0A0B4J2A0 478 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms