RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PRR13Q9NZ81 148 aa10.21□□□□□ -0.77
SPTLC1-207ENST00000488921 IGHV3-66A0A0C4DH42 116 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 SNRPGP15A8MWD9 76 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 IFNA21P01568 189 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 YPEL3P61236 119 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 OR1S1Q8NH92 325 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 RABAC1Q9UI14 185 aa10.2□□□□□ -0.78
SPTLC1-207ENST00000488921 MPTX1A8MV57 137 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 SSNA1O43805 119 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 HNRNPCP07910 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 P2RY1P47900 373 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 TMEM217Q8N7C4 229 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 STXBP6Q8NFX7 210 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 GATAD1Q8WUU5 269 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 MITD1Q8WV92 249 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 TMEM170AQ8WVE7 144 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 ACY3Q96HD9 319 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 CSTL1Q9H114 145 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 RBKSQ9H477 322 aa10.19□□□□□ -0.78
SPTLC1-207ENST00000488921 TENM2Q9NT68 2774 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 A0A0J9YWU9 116 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 HELTA6NFD8 242 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 IFNA4P05014 189 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 SLC25A6P12236 298 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 ATF4P18848 351 aaPredicted RBP10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 AP2S1P53680 142 aaPredicted RBP10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 DEFB131AP59861 70 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 ZNF124Q15973 351 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 LILRB2Q8N423 598 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 LRTM2Q8N967 370 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 NPIPB3Q92617 1050 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 TMED3Q9Y3Q3 217 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 RYR2Q92736 4967 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 DNAH1Q9P2D7 4330 aa10.18□□□□□ -0.78
SPTLC1-207ENST00000488921 MED6O75586 246 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 TOMM40O96008 361 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 IL4P05112 153 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 HOXB5P09067 269 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 NUP62P37198 522 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 RAB11AP62491 216 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 STHQ8IWL8 128 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 SLC35E1Q96K37 410 aa10.17□□□□□ -0.78
SPTLC1-207ENST00000488921 CXorf65A6NEN9 183 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 NUPR2A6NF83 97 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 K7EQG2 157 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 RD3LP0DJH9 198 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 GPX4P36969 197 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 LEMD1Q68G75 181 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 PFDN2Q9UHV9 154 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 ALG5Q9Y673 324 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 U3KQE9 123 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 ALMS1Q8TCU4 4167 aa10.16□□□□□ -0.78
SPTLC1-207ENST00000488921 C7orf66A4D0T2 115 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 C5orf51A6NDU8 294 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 FAM25EA8MYX2 175 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 PITX3O75364 302 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 CA1P00915 261 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 FABP1P07148 127 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 RPP30P78346 268 aaKnown RBP10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 USF2Q15853 346 aaPredicted RBP10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 C16orf54Q6UWD8 224 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 FAM24BQ8N5W8 94 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 OR51G1Q8NGK1 321 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 DCANP1Q8TF63 244 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 GLMPQ8WWB7 406 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 MED28Q9H204 178 aa10.15□□□□□ -0.78
SPTLC1-207ENST00000488921 ZFP92A6NM28 416 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 PSG1P11464 419 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 GGNBP1Q5YKI7 109 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 GSG1LQ6UXU4 331 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 RNF125Q96EQ8 232 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 RARRES2Q99969 163 aa10.14□□□□□ -0.79
SPTLC1-207ENST00000488921 ADAP1O75689 374 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 SPP1P10451 314 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 IAPPP10997 89 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 SNRPD3P62318 126 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 GAMTQ14353 236 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 OR8G2PQ6IF36 304 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 C11orf68Q9H3H3 251 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 SEPSECSQ9HD40 501 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-207ENST00000488921 GOSR2O14653 212 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 BUB3O43684 328 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 SYNGR2O43760 224 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 IAH1Q2TAA2 248 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 Q6ZNX1 250 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 NRN1Q9NPD7 142 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 GSKIPQ9P0R6 139 aa10.12□□□□□ -0.79
SPTLC1-207ENST00000488921 PAIP2BQ9ULR5 123 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms