RNA–Protein interactions for RNA: ENST00000487547.1

USP34-216, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 612 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-216ENST00000487547 CCDC42Q96M95 316 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 C14orf105Q9NVL8 296 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 HECW2Q9P2P5 1572 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 ROBO3Q96MS0 1386 aa0.32□□□□□ -2.36
USP34-216ENST00000487547 TCRBV4S1A1TA0A5B7 111 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 DHFRP00374 187 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 PPIBP23284 216 aaKnown RBP0.31□□□□□ -2.36
USP34-216ENST00000487547 C12orf74Q32Q52 190 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 LINC00575Q6W349 94 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 OR6V1Q8N148 313 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 SLC30A7Q8NEW0 376 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 OR52L1Q8NGH7 329 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 SLC25A40Q8TBP6 338 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 PRRT1Q99946 306 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 PRADC1Q9BSG0 188 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 HECW1Q76N89 1606 aa0.31□□□□□ -2.36
USP34-216ENST00000487547 hADV38S2A0JD32 116 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 J3QRK9 145 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 AP3S2P59780 193 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 DYNLT1P63172 113 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 EIF5AP63241 154 aaKnown RBP0.3□□□□□ -2.36
USP34-216ENST00000487547 IMPG1Q17R60 797 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 C2orf82Q6UX34 121 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 ADAT3Q96EY9 351 aaPredicted RBP0.3□□□□□ -2.36
USP34-216ENST00000487547 GPER1Q99527 375 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 UQCC1Q9NVA1 299 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 TVP23BQ9NYZ1 205 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 ORMDL1Q9P0S3 153 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 TNFSF18Q9UNG2 199 aa0.3□□□□□ -2.36
USP34-216ENST00000487547 MED1Q15648 1581 aaPredicted RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 DENND4CQ5VZ89 1909 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 IGHV1-58A0A0C4DH39 117 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 TIMM17BO60830 172 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 LYPLA2O95372 231 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 ZNF682O95780 498 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 CD2P06729 351 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 C8GP07360 202 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 RPS17P08708 135 aaKnown RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 SRP14P37108 136 aaKnown RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 IAH1Q2TAA2 248 aaPredicted RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 TRIM4Q9C037 500 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 RNASE7Q9H1E1 156 aaKnown RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 PLAC8Q9NZF1 115 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 NOSIPQ9Y314 301 aaKnown RBP0.29□□□□□ -2.36
USP34-216ENST00000487547 ECM29Q5VYK3 1845 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 TNS3Q68CZ2 1445 aa0.29□□□□□ -2.36
USP34-216ENST00000487547 A0A087WUJ7 227 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 PDE6DO43924 150 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 NUPR1O60356 82 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 RPP14O95059 124 aaKnown RBP0.28□□□□□ -2.36
USP34-216ENST00000487547 IGLV3-1P01715 115 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 CEBPGP53567 150 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 KRTAP20-1Q3LI63 56 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 LYRM7Q5U5X0 104 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 PTRHD1Q6GMV3 140 aaKnown RBP0.28□□□□□ -2.36
USP34-216ENST00000487547 Q6Q795 121 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 Q8IYB0 196 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 TP53RKQ96S44 253 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 CHCHD2Q9Y6H1 151 aaPredicted RBP0.28□□□□□ -2.36
USP34-216ENST00000487547 TAF1LQ8IZX4 1826 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
USP34-216ENST00000487547 KDM6AO15550 1401 aaPredicted RBP0.28□□□□□ -2.37
USP34-216ENST00000487547 SNRNP200O75643 2136 aaKnown RBP0.28□□□□□ -2.37
USP34-216ENST00000487547 MED12Q93074 2177 aa0.28□□□□□ -2.37
USP34-216ENST00000487547 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 ZNF462Q96JM2 2506 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 KPNA3O00505 521 aaPredicted RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 SRIP30626 198 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 KRR1Q13601 381 aaKnown RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 SPINK9Q5DT21 86 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 HAGHLQ6PII5 290 aaPredicted RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 C12orf45Q8N5I9 185 aaPredicted RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 OR11H6Q8NGC7 330 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 LINC00052Q96N35 136 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 PARD6GQ9BYG4 376 aaPredicted RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 PSTPIP2Q9H939 334 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.27□□□□□ -2.37
USP34-216ENST00000487547 IDI2-AS1Q9NZ38 188 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 GLTPQ9NZD2 209 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 PRELID3BQ9Y3B1 194 aa0.27□□□□□ -2.37
USP34-216ENST00000487547 NAV2Q8IVL1 2488 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 TTC28Q96AY4 2481 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 IGLV3-32A0A0A0MS00 114 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 F8W1H4 67 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 H3BRM9 83 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 AESQ08117 197 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 ITGB3BPQ13352 177 aaPredicted RBP0.26□□□□□ -2.37
USP34-216ENST00000487547 EDDM3AQ14507 147 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 KRTAP26-1Q6PEX3 210 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 C4orf22Q6V702 233 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 TEN1Q86WV5 123 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 PDZD9Q8IXQ8 264 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 OR51A2Q8NGJ7 313 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 OR5D14Q8NGL3 314 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 LINC00467Q9BRT7 94 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 TMEM138Q9NPI0 162 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 PCTPQ9UKL6 214 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 RTL1A6NKG5 1358 aa0.26□□□□□ -2.37
USP34-216ENST00000487547 ADCY9O60503 1353 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms