RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TRAV2A0A0B4J234 112 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 NKX2-1P43699 371 aaPredicted RBP13.61□□□□□ -0.23
COL1A1-206ENST00000485870 DEFB131AP59861 70 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 ZNF90Q03938 601 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 DEFB135Q30KP9 77 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 C16orf54Q6UWD8 224 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 LINC00299Q6ZSB3 139 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 MITD1Q8WV92 249 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 RNF125Q96EQ8 232 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 PBDC1Q9BVG4 233 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 NUDT15Q9NV35 164 aa13.61□□□□□ -0.23
COL1A1-206ENST00000485870 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
COL1A1-206ENST00000485870 KIR2DL5BA0A0G2JN68 375 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 KIR2DL5BA0A0G2JPC4 375 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 SSSCA1O60232 199 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 SCGB1D2O95969 90 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 IAH1Q2TAA2 248 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-206ENST00000485870 LEMD1Q68G75 181 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 KIR2DL5AQ8N109 375 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 STPG3Q8N7X2 389 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 KIR2DL5BQ8NHK3 375 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
COL1A1-206ENST00000485870 PRSS46E5RG02 174 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 K7EQG2 157 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 UBE2CO00762 179 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 EIF2B2P49770 351 aaKnown RBP13.59□□□□□ -0.23
COL1A1-206ENST00000485870 OR2F1Q13607 317 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 SEC22CQ9BRL7 303 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 GSKIPQ9P0R6 139 aa13.59□□□□□ -0.23
COL1A1-206ENST00000485870 RYR3Q15413 4870 aa13.58□□□□□ -0.23
COL1A1-206ENST00000485870 IGKV1OR2-108A0A075B7D4 117 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 HELTA6NFD8 242 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 CCSO14618 274 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 FABP1P07148 127 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 ZNF688P0C7X2 276 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 LYZP61626 148 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 Q6ZWC4 215 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 THAP8Q8NA92 274 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 ZBTB8BQ8NAP8 495 aaPredicted RBP13.58□□□□□ -0.24
COL1A1-206ENST00000485870 TRGV9Q99603 122 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 CSMD3Q7Z407 3707 aa13.58□□□□□ -0.24
COL1A1-206ENST00000485870 FAM240BA0A1B0GVZ2 78 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 SPRY2O43597 315 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 BUB3O43684 328 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 H2AFB2P0C5Z0 115 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 OR8G2PQ6IF36 304 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 ACOT7LQ6ZUV0 252 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 DCANP1Q8TF63 244 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 PTTG2Q9NZH5 202 aa13.57□□□□□ -0.24
COL1A1-206ENST00000485870 AGRNO00468 2067 aa13.56□□□□□ -0.24
COL1A1-206ENST00000485870 AP2S1P53680 142 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-206ENST00000485870 AKR1C1Q04828 323 aa13.56□□□□□ -0.24
COL1A1-206ENST00000485870 SIGLEC15Q6ZMC9 328 aa13.56□□□□□ -0.24
COL1A1-206ENST00000485870 ZNF431Q8TF32 576 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-206ENST00000485870 WDR12Q9GZL7 423 aaKnown RBP13.56□□□□□ -0.24
COL1A1-206ENST00000485870 CSTL1Q9H114 145 aa13.56□□□□□ -0.24
COL1A1-206ENST00000485870 TP53TG1Q9Y2A0 90 aa13.56□□□□□ -0.24
COL1A1-206ENST00000485870 SMCO3A2RU48 225 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 SNRPGP15A8MWD9 76 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 FAM25EA8MYX2 175 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 NUP62P37198 522 aaPredicted RBP13.55□□□□□ -0.24
COL1A1-206ENST00000485870 PAX9P55771 341 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 ASAH1Q13510 395 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 ZNF846Q147U1 533 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 RNF183Q96D59 192 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 SMIM8Q96KF7 97 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 PFDN2Q9UHV9 154 aa13.55□□□□□ -0.24
COL1A1-206ENST00000485870 RCL1Q9Y2P8 373 aaKnown RBP13.55□□□□□ -0.24
COL1A1-206ENST00000485870 CCNKO75909 580 aa13.54□□□□□ -0.24
COL1A1-206ENST00000485870 STHQ8IWL8 128 aa13.54□□□□□ -0.24
COL1A1-206ENST00000485870 PPP1R14BQ96C90 147 aa13.54□□□□□ -0.24
COL1A1-206ENST00000485870 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
COL1A1-206ENST00000485870 NRN1Q9NPD7 142 aa13.54□□□□□ -0.24
COL1A1-206ENST00000485870 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
COL1A1-206ENST00000485870 KNCNA6PVL3 124 aa13.53□□□□□ -0.24
COL1A1-206ENST00000485870 UPK1BO75841 260 aa13.53□□□□□ -0.24
COL1A1-206ENST00000485870 MBPP02686 304 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-206ENST00000485870 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
COL1A1-206ENST00000485870 GATA2P23769 480 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-206ENST00000485870 RRAS2P62070 204 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-206ENST00000485870 PSMG4Q5JS54 123 aa13.53□□□□□ -0.24
COL1A1-206ENST00000485870 C12orf45Q8N5I9 185 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-206ENST00000485870 A0A0J9YWU9 116 aa13.52□□□□□ -0.25
COL1A1-206ENST00000485870 PMS2P5A8MQ11 134 aa13.52□□□□□ -0.25
COL1A1-206ENST00000485870 CA1P00915 261 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-206ENST00000485870 TMEM14EPQ6UXP3 125 aa13.52□□□□□ -0.25
COL1A1-206ENST00000485870 IL17DQ8TAD2 202 aa13.52□□□□□ -0.25
COL1A1-206ENST00000485870 ENKURQ8TC29 256 aa13.52□□□□□ -0.25
COL1A1-206ENST00000485870 LSM5Q9Y4Y9 91 aaKnown RBP13.52□□□□□ -0.25
COL1A1-206ENST00000485870 TSC22D2O75157 780 aa13.51□□□□□ -0.25
COL1A1-206ENST00000485870 TAS2R30P59541 319 aa13.51□□□□□ -0.25
COL1A1-206ENST00000485870 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
COL1A1-206ENST00000485870 ACTL10Q5JWF8 245 aa13.51□□□□□ -0.25
COL1A1-206ENST00000485870 TMEM182Q6ZP80 229 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-206ENST00000485870 TMEM144Q7Z5S9 345 aa13.51□□□□□ -0.25
COL1A1-206ENST00000485870 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
COL1A1-206ENST00000485870 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms